Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02272 ATGACTTGCTTCCCATTCTCATTTGGTAGGAAAGTGCCTTCTGCACCAAAACACGATCCAGATATTGATGAAGAACTCTCAGGCATTCAAAATGTAAGAATCTTTACCTTCAAAGAACTAAAAGTTGCATCTGACAATTTCAGTCAGTCCAATAAAATTGGGCAGGGTGGCTTTGGTTCTGTTTATAAGGGATTACTAAAAGATGGGAAAGTAGCTGCTATAAAAGTTCTTTCAGAAGAATCAACTCAAGGGGTGAAAGAATTTATGACAGAGATTAATGTCATCTCAGAAATAGAGCATGAAAATTTGGTTAAGCTATATGGTTGTTGTGTGGAAGGGAAAAACCGAATATTAGTCTACAATTTTCTTGAGAACAATAGCCTTGCGCAAACCATTTTAGGTAAATGCTTTGTAATTTTGTGA 423 0.3593 MTCFPFSFGRKVPSAPKHDPDIDEELSGIQNVRIFTFKELKVASDNFSQSNKIGQGGFGSVYKGLLKDGKVAAIKVLSEESTQGVKEFMTEINVISEIEHENLVKLYGCCVEGKNRILVYNFLENNSLAQTILGKCFVIL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02272 140 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 134 - -
Phac11g02272 140 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Phac11g02272 140 ProSiteProfiles Protein kinase domain profile. 47 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02272 140 SUPERFAMILY Protein kinase-like (PK-like) 22 135 IPR011009 -
Phac11g02272 140 FunFam cold-responsive protein kinase 1 18 122 - -
Phac11g02272 140 Pfam Protein tyrosine and serine/threonine kinase 49 131 IPR001245 GO:0004672|GO:0006468
Phac11g02272 140 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02272 Phac-Chr11 33742926 33746322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02272 21 135 Receptor kinase-like Gene Family AT1G07650 56.034 2.15e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02272 PK_Tyr_Ser-Thr 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02272 - - var:108339154 245.358