Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02221 ATGGTGAGATTCAACTTGGTCATGCTTTGCTTATCTGTGTTGTTACATGCTGTTAATGCATTGAACACTGATGGGGTGGCTCTTCTGTCACTCCAGAAGCATTGGACATTTGTTCCTCCTTCCATAAACTCGAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTAGGAGTCCAGTGTGACAATAACCATAATGCAATCTTTCTTAATCTCTCTGGACACTCTATTTCAGGTCTTTTGGGACCTGAAATAGGACACTTGAGTCATTTGCAAACACTTGACTTGGCCTCAAATAACTTGTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTCTGCTTCAGAACCTGGACCTTTCTTATAACAGTATCACAGGAAACATACCTGATAGTTTGAGAAACTTGCAGAATTTAGTCTCTTTCAGTGTTGGGTACAATATGCTAACCGGTCCAATTCCTGAGTTCTTGTTTCAACTTCAACACTTGGAAGATCTTCTCCTGAACCGAAACTCTTTGACTGGTTCCATTCCAATGAATGTTGGGAACGGTACACAAATTTTGATGCTGTATCTAGATGGTAATCAGTTGTCAGGAGGGATTCCCCCCTCCATTGGAAACTGCAGTAAATTAGTGGAGCTGTATTTGGATTATAACCAGTTGCATGGAGTTCTACCTGAAAGTCTTAACAATCTCCATAGTGTTGTTAAGTTAAGTCTCAGTAATAATAGACTTGAGGGTACCATTCCATTGTTTGGTTCTAGCATATGTAAAAGTTTACAGTATTTGGACCTTTCAGTCAATAAATTTAGTGGAGGCATACCTTCAACCTTGGGAAATTGCAGTGGATTAGTAGATATTTATGCTTTTAACACAAGTTTAGGAGGTAGCATCCCATCATCCTTGGGCCAACTAAGAGAACTTTCTATTCTTCGCATTGAAAACAATCATTTGTCAGGACAGATACCTTCAGAAATTGGTAATTGTAGGTCGTTACAACAGTTGATGTTGAATAACAATGAACTTGAGGGAGAGATTCCTAGTGAATTTGGAAAGCTAAGTCAATTGCAAGATCTCAGACTTCATTACAACCATTTGACAGGTGGAATTCCAGTAAGCATTTGGAAAATTTCTAGCCTTCAGGAACTGCATGTGTATTACAATAACCTTTCTGGGCAGGTGCCTTCAGAATTGACAAAACTCAAACAACTGAAAAAACTCACCTTGTATCACAATCAATTCTCTGGAGTCATTCCTCAAAGCTTAGGAATCAATAGCAGTTTAGAGGTGTTGGATATCTCATATAATCACTTCACTGGCAACATCCCACCTAATCTCTGCTTTGGACAGCAATTAGTTAGGCTAATCTTGGCTTCAAATCAATTTCAAGGTGGTATACCACCTGACATAGGAAGATGCACAACACTTGTTAGGTTACGGCTTGATGGAAACAACTTCACTGGACCTTTACCTCATTTTACAAGCAATAGTAGTCTCACCTTCGTGGACTTCAGTGAGAACAATATCAATGGAGCAATTCCATCAAGTTTGGGAAACTGCACAAATCTTACTAATGTTATTTTGTCCCACAACAATCTTTCTGGTGTCATACCCTTTGAGCTAGGAAACCTTGTGAACCTTCAAAGGCTGAACCTTTCTCACAACAAATTAGGAGGTTCTTTGCCACCTGAGCTGTCAAACTGCAAGAAAATGCAATACTTTGATGCTGGATTCAATTCTCTAAATGGTTCATTCCCATCGAGTTTAAGAACTTGGACAGGGTTGACAACATTAAATTTAAGGGACAATCATTTCACTGGTGGTATCCCAACTTTCTTATCAGAATATGAAGGCCTTTCTGATCTACATCTTGGGGGAAATGATTTTGGAGGCCAAATTCCTAGATCAATTGGTGAGTTGCACAATCTTTTGTATGAGTTGAATCTAAGTGCTAATGAGCTAACTGGTGAAATTCCTCCAGAGATTGGGAAACTGAAATCCCTGCAAAGCCTCGATATTTCTCTTAACAACCTGACTGGAAAAATTGAAGTTCTTGAAGATCTCTCTTCATTGACTGAACTCAACATTTCATACAATTCTTTTTCTGGTTCTCTTCCAGACACACTGGTGAACTTGCTCCATTCTTCTCCTCTATCATTCTTGGGCCTTCCTGGCTTATGTATTAGATGTTTTCCATCGAATTGCTCCAAAAGTAACAACTTGAAGCCATGTGATGAGAGCAATTCTACACATAAAAAAGGGCTGAGTAAAATTAAAGTTGTGTTGATAGCACTTGGATCTACACTACTTGTAACATTTCTGTTGCTTGGTCTTGTTTACTGGCTACACTATAAGCAACATGTGAAGATTTTTCCTGAACAACGACCATCAACTTTCCTCAAGAAGGTGATGAAGGTTACACAGAACCTAAATGATAGGCATATCATTGGGAGAGGAGCGCATGGAGTTATTTACAAAGTTGAATTCAGTCAAGACAATGTTTATGTCATAAAGAAATTTCCCTTTTCACACAACGATGATCAGATTACTAGCATGACCACAGAGATTAAAACCACTGCAATGATTAGGCACCGAAATCTAGTAAGAATAAAAAACTTCTGGTTAAGAAAGGACTGTGGTCTAATTCTGTACAAGTACATGGAAAATGGAAGTCTTCATGATGTTCTGCATGAGAAGTATCCACCACCACCTTTAGAGTGGAATGTCCGCTATAAGATTGCAGTTGGAATTGCACATGGACTTGAATATCTTCATCATGATTGTCATCCTTTCATAGTGCACAGAGACATTAAACCAAAGAATATACTTTTGGATTCTGACATGGAGCCTCATATTGCTGATTTTGGCATTGCAAGGCTTCTAGACCATTCCTCTTCATTGCAATCTTTCTCTGTTCCTGGTACAGTTGGGTACATTGCTCCAGAGAGTGCTTATTCAGTAGTGATGAGTACAAAGTCTGATGTGTATAGTTATGGAGTGCTTTTGCTAGAACTGATAAGCAGAAAGAAGGTGCTAGATGATCCTTCATTTGTGGAAGGAACAGATCTTGTGGAGTGGGTCACATTTACCTGGGAAAAAACAAAATGCATTGATGGAATTGTTGACTCAGGGCTTGAAGAGGAACTTTTGGCTTCAAATTTGAAGGAAGAAGTTGAACAAATGCTTCTGATGGCATTGAGATGTACTAACAAGCATCCAAGTGAGAGACCAACAATGAGAGAAGTGGTTAAGGACATGACAGTTAGATGCAAAAAAGAAAAAATACTTAAATAG 3294 0.3892 MVRFNLVMLCLSVLLHAVNALNTDGVALLSLQKHWTFVPPSINSSWNASDSTPCSWLGVQCDNNHNAIFLNLSGHSISGLLGPEIGHLSHLQTLDLASNNLSGKIPPELGNCSLLQNLDLSYNSITGNIPDSLRNLQNLVSFSVGYNMLTGPIPEFLFQLQHLEDLLLNRNSLTGSIPMNVGNGTQILMLYLDGNQLSGGIPPSIGNCSKLVELYLDYNQLHGVLPESLNNLHSVVKLSLSNNRLEGTIPLFGSSICKSLQYLDLSVNKFSGGIPSTLGNCSGLVDIYAFNTSLGGSIPSSLGQLRELSILRIENNHLSGQIPSEIGNCRSLQQLMLNNNELEGEIPSEFGKLSQLQDLRLHYNHLTGGIPVSIWKISSLQELHVYYNNLSGQVPSELTKLKQLKKLTLYHNQFSGVIPQSLGINSSLEVLDISYNHFTGNIPPNLCFGQQLVRLILASNQFQGGIPPDIGRCTTLVRLRLDGNNFTGPLPHFTSNSSLTFVDFSENNINGAIPSSLGNCTNLTNVILSHNNLSGVIPFELGNLVNLQRLNLSHNKLGGSLPPELSNCKKMQYFDAGFNSLNGSFPSSLRTWTGLTTLNLRDNHFTGGIPTFLSEYEGLSDLHLGGNDFGGQIPRSIGELHNLLYELNLSANELTGEIPPEIGKLKSLQSLDISLNNLTGKIEVLEDLSSLTELNISYNSFSGSLPDTLVNLLHSSPLSFLGLPGLCIRCFPSNCSKSNNLKPCDESNSTHKKGLSKIKVVLIALGSTLLVTFLLLGLVYWLHYKQHVKIFPEQRPSTFLKKVMKVTQNLNDRHIIGRGAHGVIYKVEFSQDNVYVIKKFPFSHNDDQITSMTTEIKTTAMIRHRNLVRIKNFWLRKDCGLILYKYMENGSLHDVLHEKYPPPPLEWNVRYKIAVGIAHGLEYLHHDCHPFIVHRDIKPKNILLDSDMEPHIADFGIARLLDHSSSLQSFSVPGTVGYIAPESAYSVVMSTKSDVYSYGVLLLELISRKKVLDDPSFVEGTDLVEWVTFTWEKTKCIDGIVDSGLEEELLASNLKEEVEQMLLMALRCTNKHPSERPTMREVVKDMTVRCKKEKILK* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02221 1097 SUPERFAMILY RNI-like 418 742 - -
Phac11g02221 1097 ProSiteProfiles Leucine-rich repeat profile. 546 568 IPR001611 GO:0005515
Phac11g02221 1097 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Phac11g02221 1097 SUPERFAMILY L domain-like 36 198 - -
Phac11g02221 1097 SMART LRR_typ_2 305 329 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 353 377 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 401 424 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 640 665 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 232 254 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 160 184 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 208 231 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 88 112 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 544 568 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 426 449 IPR003591 -
Phac11g02221 1097 SMART LRR_typ_2 688 711 IPR003591 -
Phac11g02221 1097 Gene3D Transferase(Phosphotransferase) domain 1 887 1095 - -
Phac11g02221 1097 SMART LRR_sd22_2 544 576 - -
Phac11g02221 1097 SMART LRR_sd22_2 88 120 - -
Phac11g02221 1097 SMART LRR_sd22_2 665 690 - -
Phac11g02221 1097 SMART LRR_sd22_2 208 234 - -
Phac11g02221 1097 Pfam Leucine Rich repeat 87 104 IPR001611 GO:0005515
Phac11g02221 1097 FunFam Serine/threonine-protein kinase-like protein CCR4 887 1097 - -
Phac11g02221 1097 Gene3D Phosphorylase Kinase; domain 1 780 886 - -
Phac11g02221 1097 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Phac11g02221 1097 Gene3D Ribonuclease Inhibitor 184 423 IPR032675 -
Phac11g02221 1097 FunFam Receptor-like protein kinase 7 203 450 - -
Phac11g02221 1097 PRINTS Leucine-rich repeat signature 115 128 - -
Phac11g02221 1097 PRINTS Leucine-rich repeat signature 544 557 - -
Phac11g02221 1097 SMART serkin_6 810 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02221 1097 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 181 - -
Phac11g02221 1097 Coils Coil 668 688 - -
Phac11g02221 1097 ProSiteProfiles Leucine-rich repeat profile. 667 689 IPR001611 GO:0005515
Phac11g02221 1097 SUPERFAMILY Protein kinase-like (PK-like) 793 1086 IPR011009 -
Phac11g02221 1097 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 342 1084 - -
Phac11g02221 1097 Gene3D Ribonuclease Inhibitor 21 183 IPR032675 -
Phac11g02221 1097 SUPERFAMILY RNI-like 153 488 - -
Phac11g02221 1097 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 736 - -
Phac11g02221 1097 ProSiteProfiles Protein kinase domain profile. 810 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02221 1097 Pfam Leucine Rich Repeat 427 447 IPR001611 GO:0005515
Phac11g02221 1097 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515
Phac11g02221 1097 Pfam Leucine Rich Repeat 546 568 IPR001611 GO:0005515
Phac11g02221 1097 Gene3D Ribonuclease Inhibitor 496 743 IPR032675 -
Phac11g02221 1097 Pfam Leucine rich repeat 330 390 IPR001611 GO:0005515
Phac11g02221 1097 Pfam Leucine rich repeat 644 700 IPR001611 GO:0005515
Phac11g02221 1097 Pfam Protein kinase domain 813 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02221 1097 Gene3D Ribonuclease Inhibitor 425 495 IPR032675 -
Phac11g02221 1097 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02221 Phac-Chr11 33254151 33257812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02221 17 1084 Receptor kinase-like Gene Family AT1G73080 49.770 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac11g02221 Pkinase 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02221 - - qsu:112010432 1261.51