Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02197 ATGGCTGACATAGCGGGTCTGGTTGAGGCTGCAGGGGCAAGATTTAGTTCGTTGGAGCTTATTGGGCAGGGATCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTAAACAAAGAAGTTGCTATCAAAGTGATTGATTTGGAAGAATCGTTGGTTCTTGATGAAGTTCTTGTAGAGAACTTCAACAAGGGTTGGCATAAGCTAGTTTTGGGAGGCCATGGTATTCTTGGTTTGTTTGTTATAGAATTTGTTAGTAGAGAGGATGAAATAGAGGACATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCTGCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTAGTAGCTTGTATTGGAGTAACTGGTGCAGGAGGCAGTGGAAGATCCTGCCATGTGGAAGCCATGAGGAAGGAAGGGAGGATTAATCTGCAATCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGAGATTTACTTCATGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTAACTGAGAATGGTGATGTAAAGGTTGCTGATTTTGGTGTTTCTGCACAGTTAACTAGAACCATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTTTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCAGATCTTCATCCAATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCACCACAACTAGATGAACACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGAGGCCAAGTGCTAAAGAGCTTCTTAGACATCGTTTCATTCGGAATGCCAGGAAGAGTCCTAAGCTATTGGAGAGAATACGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATGAGGCAACACCTAGAAATGCCCCAAGGGGGATTGGGGGGGAGGCATCTGATACTATTAAGGTTGCAAAAGATTTAAGGGGTGATGACACTAATCAGCCTAGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCCAAAAGAAAGTCCTGAGAGTGGCTATCATGGAGGATCTGGCAATAAAAACAAGTTGCTAGAGACTTCTTTTGGAAAAGATTTGGGAGTTCCCTACCATGATGAACATCTGGATAATCATCTTGAAGATGATGAGTTGTTTGGGAATGGATTAGGAACTGTTGTTGTTCGGTCTCCAAAAGGACAACAGTCATCACTGTTTCGTGACCAAAGCTCTCGATCCAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACTAGCGGAACTGTTGTTTTGCGTAGTCATCACGATGATTCTGATTCTCCACAGACCCCAAGGTCCCGACTGGGACATAATAGCAGAAATTCAAATGCCTCATTTGAAGATAGTGCTACGAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGTGGATTGAGGAAAATGAATGTCCGGGATAGATTTGCACTGGGAAAACTTAACAATGATGTACAGGAAAGCAGGAGAGAACATATGTCAACCAGCTTTGATTCTTCCAGACCATCTCGTGAATCCATTGATGCACAAAAGGGGAATTCAAGATCACAGTTCGCTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCGCCCTTATCTGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGAGGATCCAGAAGGGCCACTTATGCAAATTGTTATCAATGCTCTTGTAAACATGGAGAGGACAAAGCCCCAATCCTGTGATGCTCTTGTCAAAAATTTGCTTCAGCGGTTGGCGAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGTCGAATACTAAGCAAGACTAAGTCAGCTGAAGAAACCCGAAATGCAGAGACGGGTCACAAGAAGAAACAAAACAAGGAACTTCATTCAAATAGCAATTTAAGCCCCCTCGCAAGATTTCTTCTCTCAAGATGGCAAGGACAAACCTCACGGGATCTAAATTCATCATGA 2235 0.4188 MADIAGLVEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESLVLDEVLVENFNKGWHKLVLGGHGILGLFVIEFVSREDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLVACIGVTGAGGSGRSCHVEAMRKEGRINLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKRPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDEATPRNAPRGIGGEASDTIKVAKDLRGDDTNQPSISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTPKESPESGYHGGSGNKNKLLETSFGKDLGVPYHDEHLDNHLEDDELFGNGLGTVVVRSPKGQQSSLFRDQSSRSSSSYASFEDVSTSGTVVLRSHHDDSDSPQTPRSRLGHNSRNSNASFEDSATNLAEAKAAIQGGLRKMNVRDRFALGKLNNDVQESRREHMSTSFDSSRPSRESIDAQKGNSRSQFAIDDEESAKIISSSAPLSVLLIPSLKEAIAEDPEGPLMQIVINALVNMERTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRILSKTKSAEETRNAETGHKKKQNKELHSNSNLSPLARFLLSRWQGQTSRDLNSS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02197 744 MobiDBLite consensus disorder prediction 343 438 - -
Phac11g02197 744 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phac11g02197 744 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 12 689 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 571 605 - -
Phac11g02197 744 ProSiteProfiles Protein kinase domain profile. 15 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02197 744 MobiDBLite consensus disorder prediction 695 718 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 572 586 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 380 399 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 522 540 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 477 540 - -
Phac11g02197 744 MobiDBLite consensus disorder prediction 587 604 - -
Phac11g02197 744 SUPERFAMILY Protein kinase-like (PK-like) 14 356 IPR011009 -
Phac11g02197 744 Gene3D Transferase(Phosphotransferase) domain 1 79 359 - -
Phac11g02197 744 SMART serkin_6 15 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02197 744 MobiDBLite consensus disorder prediction 477 509 - -
Phac11g02197 744 FunFam Serine/threonine-protein kinase PAK 6 161 347 - -
Phac11g02197 744 Gene3D Phosphorylase Kinase; domain 1 3 62 - -
Phac11g02197 744 Pfam Protein kinase domain 89 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02197 744 MobiDBLite consensus disorder prediction 695 716 - -
Phac11g02197 744 CDD STKc_MST3_like 14 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02197 Phac-Chr11 32978562 32992658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02197 1 741 MAP Kinase Kinase Kinase Kinase AT3G15220 56.168 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Phac11g02197 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02197 K08838 - gmx:100786501 1094.72