Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02180 ATGGCTCCCACTGACAACAGATCCAACCATGTATCCGGGTCTAATTCGACCCGTTTGGACAAGGAGATCCGATACCGCGGGGTCAGGAAGAGACCGTGGGGCCGCTACGCCGCCGAGATCCGCGACCCCGGGAAGAAAACACGCGTCTGGCTCGGCACCTTCGACACCGCGGAGGAGGCCGCGCGTGCGTATGATGCGGCGGCGCGTGATTTCCGCGGCGCGAAGGCCAAGACTAATTTTCCCACACACGCGGAACTTACCCACCTGGCGCGTAGCCCCAGCCAGAGCAGCACCCTCGAGTCCCCGTCTCCGCCGCCGCTTGACCTCACTCTCACCCCACTCGCTTCCTCCGGCGCGTTCGTCTTCCCCGTCGCCCGCCCCGTGGTTTTCTTCGACGCGTTCGCGCGTGCGGAGGTGCGCGCTTTCGATCTTCCCGTGAGCGCCTTCCGCCGCACCGCCGCCGCCGCCAGCCAGACTGAATCCGAGTCATCCTCCGTGGTGGACTACGAGCGGGTCCCACATGGGAGAGTGTTGGATCTCGACCTCAATGTTCCTCCTCCGCCCGAGGTTGCATGA 576 0.651 MAPTDNRSNHVSGSNSTRLDKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAARDFRGAKAKTNFPTHAELTHLARSPSQSSTLESPSPPPLDLTLTPLASSGAFVFPVARPVVFFDAFARAEVRAFDLPVSAFRRTAAAASQTESESSSVVDYERVPHGRVLDLDLNVPPPPEVA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02180 191 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 167 - -
Phac11g02180 191 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Phac11g02180 191 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Phac11g02180 191 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 MobiDBLite consensus disorder prediction 1 16 - -
Phac11g02180 191 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Phac11g02180 191 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Phac11g02180 191 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02180 Phac-Chr11 32715788 32716836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02180 21 150 AP2-EREBP Transcription Factor Family AT3G15210 61.842 2.72e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac11g02180 AP2 5.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02180 K09286 - gmx:100785455 213.772