Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02176 ATGGATAGTGGCTACTTCAATCAGCGCCACCACCCTCACCTCGACAACAACAATGAACAGCATTTACCTCCTGGCTTCCGCTTCCACCCCACAGATGAGGAACTCATCACATACTACCTCCTCAAGAAGGTTCTAGACAGCTCCTTCACTGGCCGAGCCATAGTTGAAGTCGACCTCAACAAGTGCGAGCCATGGGAGCTTCCTGAGAAAGCAAAGATGGGGGAGAAGGAATGGTACTTCTATAGCCTTCGTGACCGTAAGTACCCAACTGGCTTACGCACCAACAGGGCCACAGAAGCTGGTTATTGGAAAGCCACTGGAAAAGACCGAGAGATCTATAGCTCCAAAACCTGTTCCCTCGTTGGAATGAAGAAAACCCTTGTTTTCTATAGAGGAAGAGCTCCAAAGGGTGAAAAGAGCAACTGGGTCATGCATGAGTATCGTTTAGAAGGCAAATTCGCTTACCACTACCTCTCCAGAAGCTCCAAGGATGAGTGGGTGATATCGCGTGTGTTTCAGAAGAACAACACCGGCGGTGCCTCCACTGTGTCAGCCGCCGCAGCCACCGGCGGTTCCAAGAAAACGAGAATAAGCACATCAAACACAAGCAGCAACATGAGCCTCTGCCCCGAACCGGGTTCACCCTCTTCCATTTACCTCCCACCGCTTCTAGAATCTTCTCCATACGCCGCCAGCAGCAGCGCCGTCGCAACATTCAACGACCGCGAAAACTACTCCTTCGAAAGCGCCGCCGCCGCCGCAGCCGCCGCCAACCAAAGGGAGCACGTGTCCTGTTTCTCCACTATATCCACCGACGCTTCCGCCTTCAACCAGCTCGCTCCGCAGCCGGAGCCGCCACTCGACCCTTTCTCCCGCTTTCACAGGAACAACGTTGGACTATCCGCCTTCCCATGTCTGAGGTCCTTGCACGACAACCTTAACCTCCCCTTCTTTTTCCCTCCCGTGGTCCATGGCGGCACTGATGTAGCAAATTATACCTCCGTCGCAAACTTTCCGGCGCCGGAGGATCCGAGGGTGGTTGACGGCAGCTCTGGCATGTCGATTGTACCGTCCGAATTGGATTGCATGTGGGGCTATTGA 1101 0.5395 MDSGYFNQRHHPHLDNNNEQHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIVEVDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKNNTGGASTVSAAAATGGSKKTRISTSNTSSNMSLCPEPGSPSSIYLPPLLESSPYAASSSAVATFNDRENYSFESAAAAAAAANQREHVSCFSTISTDASAFNQLAPQPEPPLDPFSRFHRNNVGLSAFPCLRSLHDNLNLPFFFPPVVHGGTDVANYTSVANFPAPEDPRVVDGSSGMSIVPSELDCMWGY* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02176 366 MobiDBLite consensus disorder prediction 1 26 - -
Phac11g02176 366 MobiDBLite consensus disorder prediction 1 17 - -
Phac11g02176 366 FunFam NAC domain-containing protein 100-like 31 178 - -
Phac11g02176 366 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Phac11g02176 366 SUPERFAMILY NAC domain 18 174 IPR036093 GO:0003677|GO:0006355
Phac11g02176 366 Gene3D NAC domain 31 178 IPR036093 GO:0003677|GO:0006355
Phac11g02176 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 243 - -
Phac11g02176 366 ProSiteProfiles NAC domain profile. 22 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02176 Phac-Chr11 32622334 32624817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02176 1 366 NAC Transcription Factor Family AT5G53950 50.882 1.33e-118 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g02176 NAM 3.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02176 - - gmx:100788671 567.385