Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02163 ATGGTGTTGCAAAGATATTGCCCTATGGCTTTTGTGCAATGGAGTTTCTTCGCTTGGTTTATTTGCTTTTATGTGGGACTTGAGACCCTAGCCAGTTCCTGTGACAAGCATGATTTGTTGGCCCTGAAGGAATTTGCAGGCAACCTTACCGAAGGGTCTATCATCACAGCATGGTCAGATGATGTTGTCTGCTGCAAATGGGTTGGAGTTGTTTGTGACGATGTGGTTGATGGAGCAGCTGGTAGTAGAGTGTCCAAGTTGATTCTACCAGGAATGGGTCTTAACGGCACGATTTCAAGTTCTTTAGCTTATCTTGATGAACTGAAAGTGCTTGATATTTCGTTCAATCGTCTCCAAGGTGGATTGCCTTCTGAGTTATCTAATTTGAAGCAGTTAGAAGTTCTTAACTTGAGCAATAATATTCTTTCTGGACCACTTGTTGGGGCACTCTCTGGTTTGCAATCCATTCAGACACTTAATATTTCTAGCAATTTATTTGTTGGAGAGCTCTTTCAATTTGGAGGATTACAACATCTCGTTGCTCTTAGCATAAGCAACAATTCATTCACTGGTCAGTTCAATTCTGAAATTTGCAGCTTCTCCAAGGGTATTCATATTCTTGATATATCAAAAAATAAATTTTCTGGTGGTCTTGAATGGTTGGGAAACTGCAGCACATCTCTCCAAGAGTTACATTTGGATTCCAATTTTTTTACTGGCTATCTTCCTGATTCCTTGTACTCAATGTCAGCCTTGGAGCAGCTCTCAGTCTCCATGAACAACCTCTCCGGTCAGTTAAGCATGAAGCTAAGTAATCTCTCAAACCTAAAATCTCTAATAATTTCTGGAAATCGGTTTTCAGGGGAACTCCCAAATGTTTTTGGGAATCTTTCGGACTTAGAACAACTAATAGGACACTCCAATTCATTTTCTGGATCATTGCCTTCCACCTTGGCCTTGTGCTCAAAACTTCGAGTGCTTGATCTTCGAAATAATTCTTTGACAGGTTCTGTTAGCCTTAATTTCACTGGGTTGTCTAATCTTTCCACGTTGGACCTTGGTAGCAATCATTTTAATGGACCCCTTCCAAATTCTGTGTCCAATTGCCATGAATTGACAATGTTAAGCCTTGCAAAAAATGAACTAACTGGCCAAATCCCTGGGAGTTATGCAAACCTCACTTCACTTTTGACTCTCTCTCTGTCAAACAATAGCTTTGAGAACCTATCTGGGGCGCTTTATGTACTGCAGCAGTGCAAAAATCTCACCACTCTTATCCTCACAAAGAATTTCCGTGGTGAGGAAATTTCAGAAAATTTAAGGGTAAGCTTCAAGAGCCTTGTGGTTTTAGCACTTGGAGATTGTAGTCTCAAAGGCCGTATTCCTGCCTGGCTATTGAATTGCTCGAAATTGGAAGTTCTTGATTTGTCATGGAACCATTTGGAAGGCAGTGTCCCTTCTTGGATTGGTTGGATGGATCATCTGTTCTACTTGGATTTGTCAAATAATTCTCTTACAGGAGAAATACCAAAAGGTTTGACAGAGCTGAAGGGCCTCATATCCCTAAATTATCATATATCAAGTCTCATTGCATCTGCTGCTATTCCTCTCTATGTCAAGAGAAACAAGAGTGCTAATGGGTTGCAATATAACCATGCTTCGAGTTTCCCTCCATCAATATACTTGAGCAATAACGGATTAAGTGGAACTATATGGCCTGAAATCGGTCGTTTGAGAGAACTTCATATCTTAGATTTAAGCAGGAACAACATCACCGGCACCATTCCCAGCTCTATTTCTCAGATGAAGAATTTGGAAACATTAGACTTATCTAATAATAATCTTTATGGAACTATTCCTCCATCATTTAACAACCTCACATTCTTGTCTAAGTTCAGTGTGGCATATAATCACTTATGGGGAACAATTCCAGCTGGGGGGCAATTTTCAAGTTTCCCAAATTCAAGTTTTGAGGGCAACCAGGGGCTTTGTGGGGAAACATATCGTCATTGTAACAAAGAAAAAAATGCCAACATTTATACTCGTTCCGAGGGGAAATTTGGTAAAAGCAGTGTCCTTGGCATCACAATTGGTTCAGGAGTGGGTCTTGCACTACTTATTGCAGCTATTCTGCTAAGAATGTCAAAGAGGGATGAGGATAAACCAGTGGATAACTTTGATGAGGAGCTTAGCTGGCCAAACAGAATACCTGAAGCACTTGTGACTTCAAAATTGGTGCTTTTTCAGAATTCGGATTGCAAGGATCTCACAGTTGAAGATTTGATAAACTCTACTAACAATTTTAACCAAAAAAATATAATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCAAATCTTCCAAATGGCACAAAGGTAGCTGTGAAGAAACTTTCAGGATACTGTGGTCAGGTGGAACGAGAATTCCAAGCAGAAGTTGAGGCACTCTCTAGAGCTCAACATAAGAACCTTGTTTCACTCAAAGGTTATTGTCAGCATGTCAATGACAGATTGCTAATTTACTCCTACTTGGAGAATGGAAGCCTTGACTATTGGTTGCATGAGAGTGAGGATGGAAATTCATCTCTAAAATGGAATGTAAGACTCAAAATTGCCCAAGGTGCAGCTCATGGACTAGCTTATTTGCACAAGGAGTGTGAACCACATATTGTGCACAGAGATATCAAATCTAGCAACATACTTTTGGATGATAAATTTGAAGCTTATTTGGCTGACTTTGGTCTTTCAAGGCTTCTTCAACCCTATGATACCCATGTTTCAACAGATTTAGTGGGAACTTTAGGATATATTCCTCCAGAATATAGTCAAGCACTGAAAGCAACATTCAAAGGTGATATTTATAGCTTTGGTGTTGTTCTTGTTGAGCTTCTTACTGGCCGAAGGCCTGTAGAAGTCTTTGTCGGGCAATGCAGCAGGAATCTAGTGTCTTGGGTGTTTCAGATGAAATCCGAAAATAGGGATCAAGAAATTTTTGATTCAGTGATTTGGCACAAGGATATTGAGAAACAGCTCTTAGAGGTACTTGCTATTGCTTGTAAATGTATAGATGAAGATCCAAGGCAGAGGCCCCATATCGAATTAGTTGTTTCATGGCTTGATGGTGTAGGATTTGATGGCTCTAAACAATCATCATCTTAG 3159 0.4004 MVLQRYCPMAFVQWSFFAWFICFYVGLETLASSCDKHDLLALKEFAGNLTEGSIITAWSDDVVCCKWVGVVCDDVVDGAAGSRVSKLILPGMGLNGTISSSLAYLDELKVLDISFNRLQGGLPSELSNLKQLEVLNLSNNILSGPLVGALSGLQSIQTLNISSNLFVGELFQFGGLQHLVALSISNNSFTGQFNSEICSFSKGIHILDISKNKFSGGLEWLGNCSTSLQELHLDSNFFTGYLPDSLYSMSALEQLSVSMNNLSGQLSMKLSNLSNLKSLIISGNRFSGELPNVFGNLSDLEQLIGHSNSFSGSLPSTLALCSKLRVLDLRNNSLTGSVSLNFTGLSNLSTLDLGSNHFNGPLPNSVSNCHELTMLSLAKNELTGQIPGSYANLTSLLTLSLSNNSFENLSGALYVLQQCKNLTTLILTKNFRGEEISENLRVSFKSLVVLALGDCSLKGRIPAWLLNCSKLEVLDLSWNHLEGSVPSWIGWMDHLFYLDLSNNSLTGEIPKGLTELKGLISLNYHISSLIASAAIPLYVKRNKSANGLQYNHASSFPPSIYLSNNGLSGTIWPEIGRLRELHILDLSRNNITGTIPSSISQMKNLETLDLSNNNLYGTIPPSFNNLTFLSKFSVAYNHLWGTIPAGGQFSSFPNSSFEGNQGLCGETYRHCNKEKNANIYTRSEGKFGKSSVLGITIGSGVGLALLIAAILLRMSKRDEDKPVDNFDEELSWPNRIPEALVTSKLVLFQNSDCKDLTVEDLINSTNNFNQKNIIGCGGFGLVYKANLPNGTKVAVKKLSGYCGQVEREFQAEVEALSRAQHKNLVSLKGYCQHVNDRLLIYSYLENGSLDYWLHESEDGNSSLKWNVRLKIAQGAAHGLAYLHKECEPHIVHRDIKSSNILLDDKFEAYLADFGLSRLLQPYDTHVSTDLVGTLGYIPPEYSQALKATFKGDIYSFGVVLVELLTGRRPVEVFVGQCSRNLVSWVFQMKSENRDQEIFDSVIWHKDIEKQLLEVLAIACKCIDEDPRQRPHIELVVSWLDGVGFDGSKQSSS* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02163 1052 Gene3D Ribonuclease Inhibitor 35 152 IPR032675 -
Phac11g02163 1052 ProSiteProfiles Protein kinase domain profile. 768 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02163 1052 Gene3D Phosphorylase Kinase; domain 1 734 843 - -
Phac11g02163 1052 Pfam Protein kinase domain 768 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02163 1052 ProSiteProfiles Leucine-rich repeat profile. 604 626 IPR001611 GO:0005515
Phac11g02163 1052 SMART serkin_6 768 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02163 1052 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Phac11g02163 1052 SUPERFAMILY L domain-like 53 303 - -
Phac11g02163 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Phac11g02163 1052 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 78 304 - -
Phac11g02163 1052 FunFam Tyrosine-sulfated glycopeptide receptor 1 342 676 - -
Phac11g02163 1052 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Phac11g02163 1052 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 737 843 - -
Phac11g02163 1052 PRINTS Leucine-rich repeat signature 602 615 - -
Phac11g02163 1052 PRINTS Leucine-rich repeat signature 495 508 - -
Phac11g02163 1052 SMART LRR_typ_2 602 625 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 105 128 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 492 516 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 393 416 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 578 601 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 345 369 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 129 152 IPR003591 -
Phac11g02163 1052 SMART LRR_typ_2 273 296 IPR003591 -
Phac11g02163 1052 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Phac11g02163 1052 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Phac11g02163 1052 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Phac11g02163 1052 Pfam Leucine rich repeat 579 639 IPR001611 GO:0005515
Phac11g02163 1052 FunFam Leucine-rich repeat receptor-like protein kinase 844 1050 - -
Phac11g02163 1052 PANTHER LEUCINE RICH REPEAT KINASE 2 271 1040 - -
Phac11g02163 1052 Gene3D Ribonuclease Inhibitor 390 680 IPR032675 -
Phac11g02163 1052 Pfam Leucine Rich Repeat 275 297 IPR001611 GO:0005515
Phac11g02163 1052 SUPERFAMILY L domain-like 227 651 - -
Phac11g02163 1052 SUPERFAMILY Protein kinase-like (PK-like) 751 1039 IPR011009 -
Phac11g02163 1052 Gene3D Ribonuclease Inhibitor 153 389 IPR032675 -
Phac11g02163 1052 SMART LRR_sd22_2 578 601 - -
Phac11g02163 1052 SMART LRR_sd22_2 393 411 - -
Phac11g02163 1052 SMART LRR_sd22_2 321 350 - -
Phac11g02163 1052 SMART LRR_sd22_2 492 515 - -
Phac11g02163 1052 SMART LRR_sd22_2 249 275 - -
Phac11g02163 1052 SMART LRR_sd22_2 602 628 - -
Phac11g02163 1052 SMART LRR_sd22_2 105 131 - -
Phac11g02163 1052 Gene3D Transferase(Phosphotransferase) domain 1 844 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02163 Phac-Chr11 32457731 32461854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02163 65 1051 Receptor kinase-like Gene Family AT1G55610 34.731 3.94e-164 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Phac11g02163 Pkinase 8.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02163 - - gmx:100789534 1759.58