Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02138 ATGACTTGTTGCTTTCACCTTTTCAGAAAGATAGGATCTTCCTCAGACACTCGATTGACCGGAGTTGATTTAGATGTTTCAGAAATTCAGAATGTCAATATCTACACTTACAAGGAACTGCGGAATGCCACCGCAGACTTTAGTCCTGCAAACAAGATAGGGCAGGGAGGTTTTGGAGAAGTCTATAAGGGAAAGCTGAGAAATGGTTCTCAGGTAGCTATAAAGGTTTTATCAGCTGAATCAAGACAAGGGGTCCGAGAGTTTTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCACGAGAATCTGGTTAAGTTGCATGGATGTTGTGTGGAAGGCAAGCACAGGATTTTGGTATATGGCTATCTCGAGAATAACAGCCTAGCACAAACACTTATTGGTTCAGGCCACAGTAGCATCCAATTCAGTTGGTCTACTAGAAGGAACATTTGTGTAGGTGTTGCCCGGGGCCTTGCATTCCTTCATGAAGAGGTTAGGCCACAAATTATCCACAGAGACATAAAAGCAAGCAATGTACTACTCGATAAAGATCTCCAGCCAAAAATTTCAGATTTTGGGCTTGCAAAGCTTATTCCACCAAACCTGACCCATATCAGTACACGTGTTGCTGGAACAGCTGGTTATCTAGCTCCTGAATATGCAATCCGAAATCAAGTGACTAGAAAATCAGATGTTTATAGCTTTGGAGTTTTATTATTAGAAATTGTTAGCGGAAGGCCTAACACAAATAGACGTTTACCTGCTGAAGAACAGTATCTTCTCACAAGGGCTTGGGATTTGTATGAGGGTGGGGAGACAGAAAGATTGGTGGATGCTTTTCTAGATGGAGACTTCAATATTGAGGAGGCAATAAGATTTTGTAAAATTGGTCTCCTTTGCACTCAGGATTCTCCTCAGCTCCGGCCCTCTATGTCCACTGTGCTTGAAATGCTTTTAGGTGAAAAAGATTTGAATGAGGAGAATGTGAGAAAACCAGGCATGATATTTGAATTTGTGGAAGCCAAAAGTGCAGGGAAACAAAAGGGCAAGTCTGAAGAGAAAGGTAATTTTTTGTTGGCTGAAGGGAAGCAAGATGAGTCATCTTCTTCAGACACCATGAGCTCTTTTGCTACCATGACCTTCACAGCAATATATGATCGAAGCAATTAA 1170 0.4154 MTCCFHLFRKIGSSSDTRLTGVDLDVSEIQNVNIYTYKELRNATADFSPANKIGQGGFGEVYKGKLRNGSQVAIKVLSAESRQGVREFLTEIKVISSIEHENLVKLHGCCVEGKHRILVYGYLENNSLAQTLIGSGHSSIQFSWSTRRNICVGVARGLAFLHEEVRPQIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTAGYLAPEYAIRNQVTRKSDVYSFGVLLLEIVSGRPNTNRRLPAEEQYLLTRAWDLYEGGETERLVDAFLDGDFNIEEAIRFCKIGLLCTQDSPQLRPSMSTVLEMLLGEKDLNEENVRKPGMIFEFVEAKSAGKQKGKSEEKGNFLLAEGKQDESSSSDTMSSFATMTFTAIYDRSN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02138 389 FunFam cold-responsive protein kinase 1 19 122 - -
Phac11g02138 389 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02138 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Phac11g02138 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phac11g02138 389 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02138 389 Gene3D Phosphorylase Kinase; domain 1 21 122 - -
Phac11g02138 389 Pfam Protein kinase domain 50 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02138 389 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Phac11g02138 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 363 - -
Phac11g02138 389 Gene3D Transferase(Phosphotransferase) domain 1 123 333 - -
Phac11g02138 389 MobiDBLite consensus disorder prediction 347 372 - -
Phac11g02138 389 CDD STKc_IRAK 53 318 - -
Phac11g02138 389 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02138 Phac-Chr11 32084196 32088292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02138 25 335 Receptor kinase-like Gene Family AT1G56120 54.921 2.41e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02138 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02138 - - gmx:100797257 686.026