Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02098 ATGGCGAAAACGAGGCCAGGCAGAAAGGACTTGGACTCGTACACCATAAGAGGAACCAACAAGATCGTCCGAGATGGGGTTGTCGTTGACAGCGTTTGGTTCTTTGCTGCTGCAGCCGGTGATTGCGTTCTGATGCGGCCCTCGGACACGTCCAAGCCCCCTTACGTGGCGCGCGTGGAGAAGATCGAGCAGGACAACAGGAACAACGTCAAGGTGCGTGTGAGGTGGTACTACAGACCCGAAGAGTCCATTGGTGGTCGCAGACAGTTCCATGGTGCCAAAGAGCTTTTTCTCTCCGACCACTATGATGTGCAGAGTGCGCACACCATTGAAGGCAAATGCGTTGTACACTCTTTCAAGAACTACACTAAGCTCGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTTGAGTACAAGGCTGCCACTGGGGCTTTCACTCCTGACCGTGTTGCTGTGTATTGCAAGTGTGAGATGCCATATAACCCGGATGACCTCATGGTTCAATGTGAAGGGTGCAAGGATTGGTAA 531 0.5179 MAKTRPGRKDLDSYTIRGTNKIVRDGVVVDSVWFFAAAAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02098 176 ProSiteProfiles BAH domain profile. 35 150 IPR001025 GO:0003682
Phac11g02098 176 CDD BAH_BAHCC1 40 170 - -
Phac11g02098 176 Pfam BAH domain 38 149 IPR001025 GO:0003682
Phac11g02098 176 SUPERFAMILY FYVE/PHD zinc finger 146 176 IPR011011 -
Phac11g02098 176 PANTHER OS08G0421900 PROTEIN 1 176 - -
Phac11g02098 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 176 IPR013083 -
Phac11g02098 176 SMART BAH_4 38 150 IPR001025 GO:0003682
Phac11g02098 176 Gene3D - 7 148 IPR043151 -
Phac11g02098 176 FunFam Chromatin remodeling protein EBS 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02098 Phac-Chr11 31583882 31587842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02098 45 146 Core DNA Replication Machinery Family AT4G14700 29.126 4.79e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02098 K25868 - gmx:100800993 337.421