Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02092 ATGGGAGAATCACAGAACCACCTTCTCCTTCACCAAACAGCAACACCGTCGAGATCGACGATGAGAGGCGGCGGCGTCGGCGAGATCGTGGAGGTGCAAGGCGGCCACATTGTCCGCTCCACCGGGCGGAAGGACCGCCACAGCAAGGTCTGCACTGCAAAAGGCCCCAGAGACCGCCGTGTGCGCCTGGCGGCTCACACCGCCATCCAATTCTACGACGTTCAGGACCGCCTCGGCTATGACCGCCCCAGCAAGGCGGTCGACTGGCTCATAAAAAAAGCTAAGGCGGCCATCGACGAGCTCGCAGAGCTCCCACCGTGGAACCCGACGACCACGTCAATGCAACCGCCTCAGCAACAGGAAATCGTCCTCCGCGACAACAAGTCTCTCTCTATAGAACACCCAATAGCCTTTGGCAGCCGTGGCGAGAGCAACGTTGTCTCCGGCGCTACCAGAGTTCAAGAACAATTTTCTCACCAACAGTTGGAGAGTGAAAATGCTAACATAAGCAACAGCAAGTACAATACTGGTCCTGGTTTTCTGCCACCGTCTTTGGACACTGATAACATTGCTGAGACAATCAAGACTTTCTTTCCCGTCGAAGCTACCACGACGTCATTTCAGAGTTACCCGCCGTCGGCACCGGATTTGAGGCAGCAAGATCTTCGTTTGTCGTTGCAGTCCTTTCAGGACCCTATCATGCTTCAGCAAGAGCCTCAGAGCCACCACGAGCCTGTGCTATTCGCCGGAGCGACGCTCGGCTTCGACGGCGGTTCCGGCTGGTCGGAGCACCAGCACCACCACTCGGAGGAGCATAGGTTTCTCTTTGGTGGCAACAGTGGCCATGGCGGTGGGTTTGTGTTCAACACGCCGGCGCCAGCGTTTGGCCAATTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCAGTTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCACCACAACCATCACTACCTCTCGCCGCTGATCCACCAGGGATCCGTCGCTGGCGGCTTCTCCGCCGGTGGTGGATTCTCTGGCTTCCGCATTCCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTATCCGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1146 0.5716 MGESQNHLLLHQTATPSRSTMRGGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPPWNPTTTSMQPPQQQEIVLRDNKSLSIEHPIAFGSRGESNVVSGATRVQEQFSHQQLESENANISNSKYNTGPGFLPPSLDTDNIAETIKTFFPVEATTTSFQSYPPSAPDLRQQDLRLSLQSFQDPIMLQQEPQSHHEPVLFAGATLGFDGGSGWSEHQHHHSEEHRFLFGGNSGHGGGFVFNTPAPAFGQFFSQRGPLQSSNTPSVRAWIDPSVDHHHHNHHYLSPLIHQGSVAGGFSAGGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02092 381 MobiDBLite consensus disorder prediction 1 20 - -
Phac11g02092 381 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Phac11g02092 381 MobiDBLite consensus disorder prediction 358 381 - -
Phac11g02092 381 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 306 IPR005333 GO:0003700
Phac11g02092 381 MobiDBLite consensus disorder prediction 356 381 - -
Phac11g02092 381 MobiDBLite consensus disorder prediction 1 23 - -
Phac11g02092 381 Pfam TCP family transcription factor 42 164 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02092 Phac-Chr11 31519987 31522726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02092 11 381 TCP Transcription Factor Family AT1G53230 50.000 2.90e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac11g02092 TCP 5.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02092 - - gmx:100800275 520.39