Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02089 ATGGGGGATCTCATCTTCTCATTGAAGAACCAGGAACATGGTCATCACCATAGAGCAAGACACAACAAGAAGAGGTTAACTGAGGAGCAGGTTAGCATTCTTGAGAAATGCTTTGGTTCCAACATGAAGCTTGAACCGGAGCAGAAATTCCACCTTGCAAACCAACTTGGTGTTCCTCCAAGACAAGTTGCCATTTGGTACCAGAACAAAAGGGCACGCTGGAAGACTCAGAGCCTTGAGGTGGACCATGGTGTGCTTCAGGCAAAGCTGGAGAATGTGATGGCTGAGAAGAAGCAGCTAGAGAAAGATGTGGAAAGGCTCAAAGCTGAGCTCAAGAAAGCTCAAGAGATGATGCTGATTGGAGATGTAGGCAAAGGTGGAGAAAACAGTAATACTAGTAACAATAACACTAACAACTATAACAATAATAATGGTTCTTGTTGTGAGTTTTCAACTTCTTTTGAAGAGGGAGGGAGTTCAGGGATGGTACTTGATGATGAAACTCATCAGCATGAGTGTTGGCAAAGTGGTGAGGTTATGCAGGTTGAGGAGCTCTATGCTTACTTCATGGGTGCAAATTATGGGTCAAGCTTGCATGAGAAAAGGGCATAA 612 0.4395 MGDLIFSLKNQEHGHHHRARHNKKRLTEEQVSILEKCFGSNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKTQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKKAQEMMLIGDVGKGGENSNTSNNNTNNYNNNNGSCCEFSTSFEEGGSSGMVLDDETHQHECWQSGEVMQVEELYAYFMGANYGSSLHEKRA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02089 203 Gene3D - 13 82 - -
Phac11g02089 203 ProSitePatterns 'Homeobox' domain signature. 52 75 IPR017970 GO:0000981|GO:0006355
Phac11g02089 203 FunFam Homeobox-leucine zipper protein ATHB-52 13 79 - -
Phac11g02089 203 SUPERFAMILY Homeodomain-like 11 78 IPR009057 -
Phac11g02089 203 CDD homeodomain 20 78 IPR001356 GO:0003677
Phac11g02089 203 Pfam Homeodomain 21 75 IPR001356 GO:0003677
Phac11g02089 203 Coils Coil 83 117 - -
Phac11g02089 203 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 149 IPR045224 GO:0003700
Phac11g02089 203 SMART HOX_1 19 81 IPR001356 GO:0003677
Phac11g02089 203 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02089 Phac-Chr11 31477772 31478383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02089 18 197 Homeobox Transcription Factor Family AT5G53980 41.111 1.75e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac11g02089 Homeodomain 5.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02089 - - gsj:114378167 303.138