Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02079 ATGTTGGCAATGTCATGTTTTTGCTTCTTGGTATTCTTCTGCATGTGGGGGGCATGCACATCACTGGACAGTTTAAGAGTGAGTCAAACCATCCGAGATGATAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTGGACCTGGGAAATTCATCCAGGAGATACTTAGCTATATGGTACAGAAATGTATCCCCTAGAACAGTTGTGTGGGTGGCTAACAGAAACACACCTCTTGATAATAGATCAGGAGTTCTCAAACTCAATAAGAAAGGGATTCTTGTGCTACTCAATGGCAAACACAGCATTATTTGGTCCTCCAACATCTCAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTATGTAGTGAAAATTGGACAGGGAACCGTCAAGGAGAGTATCTTGTGGCAGAGTTTTGATGATACGAGTGATACAATTTTGCCTGGAATGAAGCTTGGATGGAACTTAGCAACTGGTAGAGAAAGATATATGTCATCATGGAAAAGTGTTGATAATCCTGCTGAGGGAGAATATAGTGTTAAACTTGACCGTAGAGGATATCCTCAAGCAATTTTATTCAAGGGATCTGAGATGAAGTTCAGACTTGGGCCATGGAATGGCCAGTCATGGGCAGGGTATCCTGTTAGAAGTCCTCAAAGTTCACAAATATTTGTATTTAATAAAACAGAATTGTACTATGAGTTCAGGCTTCTGAATAGTTCAGACATCACCAGCATATTTCAATTAACCCCATCTGGCGTTGGTCAGAAAATATTTTGGAAAACTCACAACACCACCGAGAGAGTTCTCCTGCCTCAGGAGAGAGATCAATGCGAGACTTATGCTTTTTGTGGTGCAAATTCCATATGCAGTTATGACGGTAACCATCCAACTTGTGAATGCCTGAGAGGATATGTTCCCAAGTCTCCTCCTCAGTGGAACATGGCAATTTGGGACAAGGGTTGTGTTCCAAGGAATAAGTCTAATTGCAAAAACAGTTATACGGATGGCTTCTTACCCTACTCACACATGAAATTGCCAGACACATCTTCTTCGTGGTTTGATACAACTGTGAACCTTGATAAATGTCGCGAGTTATGTCTTAAAAATTGCCATTGTATTGCATATGCAAATTTAGATATTCGTGAAGGAAGTGGCTGCCTACACTGGTTCAATACTCTAGTTGACTTGAGGAATTTCTCTCAATTGGGGCAAGACATTTACATCAGAGTCCCTGCTTCAGAATTAGATCATGGTGGCCATGGAAACATGAAGAATAAGATAGTAGGAATCACTCTTGGTGTGATTATTTTGGGTTTAATCATCACAAGTGTCTGCATACTGATAATTAAAAATTCAGTGGCAGCAGGTGTATATTGTCATATGGTACAACTTCAATGGCGGAAAGAATACTTCAGATTGAGGAATGAAGACATGGATTTTCCAACATTTGAGTTGTCTATCATTGCTAAAGCCACTAATAATTTTTCCAGCAGCAATAAAATAGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACACTGCTAGATGGGAGAGAGGTGGCAGTAAAACGGAACTCATTGATGTCTGATCAAGGACAGAACGTGTTGAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAACTGTTAGGTTGCTGCATTCAAGGAGAGGAAAAGTTGTTGATCTATGAATACATGCCTAACAAGAGCTTAGATTACTTCATCTTTGGTTAG 1782 0.4012 MLAMSCFCFLVFFCMWGACTSLDSLRVSQTIRDDKNETLVSAGGIIELGFLDLGNSSRRYLAIWYRNVSPRTVVWVANRNTPLDNRSGVLKLNKKGILVLLNGKHSIIWSSNISGKAVNDPIAQLLDSGNYVVKIGQGTVKESILWQSFDDTSDTILPGMKLGWNLATGRERYMSSWKSVDNPAEGEYSVKLDRRGYPQAILFKGSEMKFRLGPWNGQSWAGYPVRSPQSSQIFVFNKTELYYEFRLLNSSDITSIFQLTPSGVGQKIFWKTHNTTERVLLPQERDQCETYAFCGANSICSYDGNHPTCECLRGYVPKSPPQWNMAIWDKGCVPRNKSNCKNSYTDGFLPYSHMKLPDTSSSWFDTTVNLDKCRELCLKNCHCIAYANLDIREGSGCLHWFNTLVDLRNFSQLGQDIYIRVPASELDHGGHGNMKNKIVGITLGVIILGLIITSVCILIIKNSVAAGVYCHMVQLQWRKEYFRLRNEDMDFPTFELSIIAKATNNFSSSNKIGEGGFGPVYKGTLLDGREVAVKRNSLMSDQGQNVLKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFG* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02079 593 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Phac11g02079 593 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Phac11g02079 593 Pfam Protein tyrosine and serine/threonine kinase 509 591 IPR001245 GO:0004672|GO:0006468
Phac11g02079 593 Pfam PAN-like domain 340 407 IPR003609 -
Phac11g02079 593 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Phac11g02079 593 CDD PAN_AP_plant 337 422 - -
Phac11g02079 593 Gene3D - 19 150 IPR036426 -
Phac11g02079 593 Pfam D-mannose binding lectin 72 178 IPR001480 -
Phac11g02079 593 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Phac11g02079 593 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 591 - -
Phac11g02079 593 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 581 - -
Phac11g02079 593 SUPERFAMILY Protein kinase-like (PK-like) 482 592 IPR011009 -
Phac11g02079 593 ProSiteProfiles Protein kinase domain profile. 506 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02079 593 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 149 - -
Phac11g02079 593 CDD B_lectin 36 150 IPR001480 -
Phac11g02079 593 SMART blect_4 28 152 IPR001480 -
Phac11g02079 593 Gene3D Phosphorylase Kinase; domain 1 469 581 - -
Phac11g02079 593 SMART ntp_6 343 421 IPR003609 -
Phac11g02079 593 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02079 Phac-Chr11 31035568 31038976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02079 478 592 Receptor kinase-like Gene Family AT4G11460 58.678 6.27e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02079 S_locus_glycop 1.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02079 - - gmx:100782811 823.542