Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02077 ATGTTGGCAATGTCATGTTTTTGCTTCTTGGTATTCTTCTGCATGTGGGGGGCATGCACATCACTGGACAGTTTAAGAGTGAGTCAAACCATCCGAGATGATAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTGGACCTGGGAAATTCATCCAGGAGATACTTAGCTATATGGTACAGAAATGTATCCCCTAGAACAGTTGTGTGGGTGGCTAACAGAAACACACCTCTTGATAATAGATCAGGAGTTCTCAAACTCAATAAGAAAGGGATTCTTGTGCTACTCAATGGCAAACACAGCATTATTTGGTCCTCCAACATCTCAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTATGTAGTGAAAATTGGACAGGGAACCGTCAAGGAGAGTATCTTGTGGCAGAGTTTTGATGATACGAGTGATACAATTTTGCCTGGAATGAAGCTTGGATGGAACTTAGCAACTGGTAGAGAAAGATATATGTCATCATGGAAAAGTGTTGATAATCCTGCTGAGGGAGAATATAGTGTTAAACTTGACCGTAGAGGATATCCTCAAGCAATTTTATTCAAGGGATCTGAGATGAAGTTCAGACTTGGGCCATGGAATGGCCAGTCATGGGCAGGGTATCCTGTTAGAAGTCCTCAAAGTTCACAAATATTTGTATTTAATAAAACAGAATTGTACTATGAGTTCAGGCTTCTGAATAGTTCAGACATCACCAGCATATTTCAATTAACCCCATCTGGCGTTGGTCAGAAAATATTTTGGAAAACTCACAACACCACCGAGAGAGTTCTCCTGCCTCAGGAGAGAGATCAATGCGAGACTTATGCTTTTTGTGGTGCAAATTCCATATGCAGTTATGACGGTAACCATCCAACTTGTGAATGCCTGAGAGGATATGTTCCCAAGTCTCCTCCTCAGTGGAACATGGCAATTTGGGACAAGGGTTGTGTTCCAAGGAATAAGTCTAATTGCAAAAACAGTTATACGGATGGCTTCTTACCCTACTCACACATGAAATTGCCAGACACATCTTCTTCGTGGTTTGATACAACTGTGAACCTTGATAAATGTCGCGAGTTATGTCTTAAAAATTGCCATTGTATTGCATATGCAAATTTAGATATTCGTGAAGGAAGTGGCTGCCTACACTGGTTCAATACTCTAGTTGACTTGAGGAATTTCTCTCAATTGGGGCAAGACATTTACATCAGAGTCCCTGCTTCAGAATTAGATCATGGTGGCCATGGAAACATGAAGAATAAGATAGTAGGAATCACTCTTGGTGTGATTATTTTGGGTTTAATCATCACAAGTGTCTGCATACTGATAATTAAAAATTCAGTGGCAGCAGGTGTATATTGTCATATGGTACAACTTCAATGGCGGAAAGAATACTTCAGATTGAGGAATGAAGACATGGATTTTCCAACATTTGAGTTGTCTATCATTGCTAAAGCCACTAATAATTTTTCCAGCAGCAATAAAATAGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACACTGCTAGATGGGAGAGAGGTGGCAGTAAAACGGAACTCATTGATGTCTGATCAAGGACAGAACGTGTTGAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAACTGTTAGGTTGCTGCATTCAAGGAGAGGAAAAGTTGTTGATCTATGAATACATGCCTAACAAGAGCTTAGATTACTTCATCTTTGTGATCAAGTTGAAGACAAAACCAGAAAAGTGGTTGGAACGTATGGCTACATGCCTCCAGAGTATGCTGTTCATGGCCATTACTCTGTGA 1866 0.403 MLAMSCFCFLVFFCMWGACTSLDSLRVSQTIRDDKNETLVSAGGIIELGFLDLGNSSRRYLAIWYRNVSPRTVVWVANRNTPLDNRSGVLKLNKKGILVLLNGKHSIIWSSNISGKAVNDPIAQLLDSGNYVVKIGQGTVKESILWQSFDDTSDTILPGMKLGWNLATGRERYMSSWKSVDNPAEGEYSVKLDRRGYPQAILFKGSEMKFRLGPWNGQSWAGYPVRSPQSSQIFVFNKTELYYEFRLLNSSDITSIFQLTPSGVGQKIFWKTHNTTERVLLPQERDQCETYAFCGANSICSYDGNHPTCECLRGYVPKSPPQWNMAIWDKGCVPRNKSNCKNSYTDGFLPYSHMKLPDTSSSWFDTTVNLDKCRELCLKNCHCIAYANLDIREGSGCLHWFNTLVDLRNFSQLGQDIYIRVPASELDHGGHGNMKNKIVGITLGVIILGLIITSVCILIIKNSVAAGVYCHMVQLQWRKEYFRLRNEDMDFPTFELSIIAKATNNFSSSNKIGEGGFGPVYKGTLLDGREVAVKRNSLMSDQGQNVLKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFVIKLKTKPEKWLERMATCLQSMLFMAITL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02077 621 SMART tyrkin_6 506 621 IPR020635 GO:0004713|GO:0006468
Phac11g02077 621 ProSiteProfiles Protein kinase domain profile. 506 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02077 621 Pfam Protein tyrosine and serine/threonine kinase 509 604 IPR001245 GO:0004672|GO:0006468
Phac11g02077 621 Gene3D Phosphorylase Kinase; domain 1 469 581 - -
Phac11g02077 621 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Phac11g02077 621 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 581 - -
Phac11g02077 621 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Phac11g02077 621 CDD PAN_AP_plant 337 422 - -
Phac11g02077 621 Pfam D-mannose binding lectin 72 178 IPR001480 -
Phac11g02077 621 SUPERFAMILY Protein kinase-like (PK-like) 482 608 IPR011009 -
Phac11g02077 621 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Phac11g02077 621 Gene3D - 19 150 IPR036426 -
Phac11g02077 621 Pfam PAN-like domain 340 407 IPR003609 -
Phac11g02077 621 CDD B_lectin 36 150 IPR001480 -
Phac11g02077 621 SMART blect_4 28 152 IPR001480 -
Phac11g02077 621 SMART ntp_6 343 421 IPR003609 -
Phac11g02077 621 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Phac11g02077 621 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 603 - -
Phac11g02077 621 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Phac11g02077 621 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02077 Phac-Chr11 31035568 31039835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02077 478 592 Receptor kinase-like Gene Family AT4G11460 58.678 6.86e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02077 PK_Tyr_Ser-Thr 5.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02077 - - gmx:100782811 825.469