Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac11g02073 | ATGTTATTTATTTGGTTTTTCTTGTTCTTATACATGACTACGACTTCCACTGCTGCTTTAGACAGTTTAGCAGTGAGTCAATCCATTCAAGATGGTAAAAATGAGACCTTGGTTTCAGCAGGTGGAATTACTGAACTGGGTTTCTTCAGCCCAGGGAATTCAGGAAGACGATATGTGGGAATATGGTTCAGAAATGTATCCCCTTTGACAATAGTGTGGGTGGCTAACCGAAATACCCCTCTTGAGAATAACTCAGGAGTTTTGAAACTCAACGAAAAAGGGATTCTTCAGCTTCTCAATGCAACAAACAGCAGCATTTGGTCAACATCATCCAACGTATCAAGCAAAGCAGGGAATAATCCAATTGCTCGACTAATGGACTCGGGAAATTTGGTAGTGAGAAATGCTCAAGAAACCAACGAGGAGGATGTGTTGTGGCAGAGTTTTGATCATCCATGTGACACATATTTGCCAGGAATGAAGCTTGGATGGAACTTGGAAACTAGTCTAGAAACTTTTCTATCATCTTCGGTTAGTGATACCGATCCTGCTGTGGGAGAATATACAATACAAGTTTCTCTTAAAGGGTATCCTCAAGTAATGAACTTCAAGGAAGGTGTTTTAGTGGCCAGAGCAGGTTCATGGAATGGCTTGTCACTGGTTGGAAATCCAGGTCCAACTCTTGAAACGTCACCAAAACTTGTGATTAGCGAAAAAGAAGTGTATTACGAGTATGAGCTTCTTGATCAATCTGCATTTTTTGTGTATATACTAACCCCTTCAGGCACAGGAAAGAGTTTGTATTGGACAACAGAAACAAGAACAGCACATGTGGTCTCAACTGGGGAGCAAGATCAGTGCGAGGATTATGCCTTTTGTGGTAACAATTCTATATGCAGCTATGATGGTAACCATCCAAGTTGTGAATGCCTCAGAGGGTACGTTCCCAAGTCTCCTGAGCAGTGGAATATATCAGTCTGGAGCAACGGTTGTGTTCCAAAGAACAAATCTACTTGTGAAAATAGTCATACAGATGGCTTCATCAAGTACACATACATGAAATTGCCAGACACTTCTTCATCATCGTTTAATACAACGATGAACCTTAATGAATGTCATAATTCATGTCTTGGAAACTGTTCTTGTACAGCATATGCAAATTTAGATGTTCGTGGTGGAGGAAGTGGATGTCTACTTTGGCTAGATAATCTAGTTGACATGAGGAGTTTCTCTCAATGGGGACAAGACTTCTATGTCAGAGTCCCTGCTTCAGAATTAGATCACGCTGGCCAAGGAAACCTCAAGAAAATGATAGTAGGAATCACTGTTGGTGTGACTATCTTTGGATTACTCATCTCATGTGTATGCATATTTATAATTAAGAATCCAGGTGCTGCAAGAAGAATTTTCAACAGGCATTACAGAACTATAGTACCCAGGAAGGAAGAGATTGATTTACCAACTTTCGATATGTCAGTCTTAGTTAATGCCACTGAAAATTTTTCAACAAGAAACAAGCTTGGGGAAGGTGGATTTGGACCAGTATACAAGGGCACACTAATAGATGGGAAAGAGATTGCAGTGAAGAGGCTTTCAAATAAATCTGAACAAGGGTTGGACGAGTTCAAAAATGAAGTGGCATTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAGCTTTTTGGTTGCTGCATTGAAGGAGAAGAAAATATGTTGATTTATGAGTACATGTCAAACAAGAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGAAAGCTCCTAGATTGGCATAAGCGTTTCAACATTATTAATGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGGCTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATTTTGTTAGATGAAAATTTGGATCCCAAAATATCAGACTTCGGCTTGGCTCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAACAGGGTGGCTGGAACATATGGTTACATACCTCCTGAGTATGCTGCACGTGGGCATTTCTCAGTGAAATCAGATGTGTTTAGTTATGGTGTAATAGTTCTAGAGATTATAAGTGGGAAGAGGAACTCAGAATTTTTGGACCCATGGCACGATAATAATCTTCTAGGATATGCATGGAGATTATGGACTGAAGACAGAGCCCTGGAATTACTGGATGAAGTGTTAGAAGAAGTATATTGTGTGCCCTTTGAAGTCATACGATGCATAGAGGTTGGGCTATTATGTGTGCAACAAAGACCAGAAGATAGACCAGATATGTCATCAGTGGTTTTAATGTTAAATGGTGAAAAATTATTGCGAAAGCCAAAGGCTCCAGGATTTTATACTGAAGTAGATGTTTCATCTCATGCGAATTCTTCATCAGCAATTCTCAAACCCAACTCTCATAATCAACTTTCCATCACAATAATTGGCAATTCATTAGATAGTTTAGCAGTGAGTGAATCCATCCAAGATGGTAAGACTTTGGTTTCTGCAGGTGGAATCACTGAAGCTGGTTTCTTTAGCCCAGGAAATTCAACAAGACGATACTTGGGTATATGGTACGCAAATGTATCCCCTTTCACAGTGGCGTGGGTGGCCAACCGAAACAGTCCTCTTGAGAATAAATCAGGAGTTCTCAAACTCAATGAAAAAGGGATTCTTGTTCTTCTAGATGCTACAAACAACACCATTTGGTCATCATCCAACATCTCAAGCAAAGCAGGGAATGATCCAATTGCTCAGCTCTTGGATTCTGGAAATTTTGTAGTTAAAAAGGGACAAGAAACCAATGGCGTCTTGTGGCAGAGTTTTGATTATCCAGGTGATACATTTATGCCAGGAATGAAACTTGGATGGGACTTAGAGACTGGTTTAGAAAGGTTTGTATCATCTTGGAAAAGTGTTGATGATCCTGCTGAGGGAGAATATGCTCTAAAAATGAATCTTAGCGGATATCCTCAAATGATGATGTTCAAGGGACCTGATAAAGAGTTTAGAGCTGGGTCGTGGAATGGATTGTCTCTAGTGGGAAATCCAGGTCCAACCTACGGCACGACACCAAGATTCGTGCTCAATGAAAAAGAGGTATATTACGAGTACGGGATTGAGGATAGTTCGTGGTTTATCGTATATAAAGTGACCCCTTCAGGAGGACAAATTTTGTATTGGACAACTCAGACAAGAAATCAACAAGTTGTCTCAAATGGGGAGCAAGATCGATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTATATGCAATTATGATGGTAGCCATCCAAGTTGTGAATGCCTTAGAAGTTATGTTCCCAAGTCTTCTGATCAGTGGAATATATCAATTTGGCTCAATGGTTGTGTTCCAAGGAATAAATCTAATTGCACAAATAGTTACACAGATGGCTTCTTGAAGTACACACACATGAAATTGCCAGACACTTCTTCGTCACGGTTTGATGCGACTATGACCCTTGATGAATGTCAGCAGTCATGCCTTATGAACTGTTCTTGTACAGGTTATGCAAGTTTAAATGTTCTTGATGGAGGTAGTGGCTGTCTACTTTGGTTTAATGATCTAGTTGACATGAGGAGTTTCTCAAAGTGGGGACAAGACTTCTATATCAGAGTCCCTGCAGAGGAATTAGATCGTGGAAAGGACAAGAAAAGCATTGTAAGAATCATTGTTGGTGTGACTATTTTTGGATTAATCATATGTGTATGCATACTGGGAATTAAAAAGTCAGGGGCTGCAAGAAAATTTTGCAACAAGCATTACAAAAATATGCAGAGGAGGGAAGACACAGATTTGCCAACTTTCGATTTCGCAGTCTTAGCCAGTGCCACTGGAAACTTTTCAATTGAAAACAAGCTTGGGGAAGGGGGTTTTGGACCAGTATACAAGGGAACATTGATAGATGGGAAAGAGTTAGCTGTGAAAAGGCTTTCTCAGAAATCTTGGCAAGGGTTGGACGAGTTCAAAAATGAAGTTGCATTGATGACCAAACTTCAGCATCGTAATCTGGTAAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAAAATGCTGATTTATGAGTACATGCCGAACCATAGCTTGGACTACGTTGTTTTTGATGAAAGTAAAAGGAAGTTGTTAGATTGGCGTAAGCGTTTCAACATTATTACTGGTATTGCTCGAGGACTGCTTTATCTTCATCAAGACTCTAGGTTGAGGATTATTCATAGAGATCTAAAAACTAGTAATATTTTACTAGATGCAAACTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATTGTTTTTGGGAGATCAAGTCGAGGCAAAAACGAATAGGGTGGCTGGAACATATGGCTATATGCCTCCTGAATATGCTGTGCATGGACATTTCTCAGTGAAATCAGATGTGTTTAGTTATGGTGTCATTGTACTAGAACTTCTAAGTGGGAAGAAAATCCGAGAATTTTCAGACCCAGAACACTGCAACAATCTTCTTGGACATGCATGGAAATTATGGACTGAAGACAGGGTACTGGAACTATTAGATGAAGTGTTAGAAGAACAGTGTACGCTGTTTGAAGTTATACGATGTATACAAGTAGGTCTATTATGTGTGCAACAAAGACCAGATCATAGGCCAGACATGTCATCGGTGGTTTTAATGCTAAATGGTGATAAATTATTGCCAAAGCCAAATGTTCCTGGTTTTTACATTGAATTTGATGTTACTTGTAAAGCAAACTCTTCATCAGCAAATCACAAACCACTCTCAGATAATGAACTTTCCATCACAATTTTAGACGCAAGATAG | 4830 | 0.3957 | MLFIWFFLFLYMTTTSTAALDSLAVSQSIQDGKNETLVSAGGITELGFFSPGNSGRRYVGIWFRNVSPLTIVWVANRNTPLENNSGVLKLNEKGILQLLNATNSSIWSTSSNVSSKAGNNPIARLMDSGNLVVRNAQETNEEDVLWQSFDHPCDTYLPGMKLGWNLETSLETFLSSSVSDTDPAVGEYTIQVSLKGYPQVMNFKEGVLVARAGSWNGLSLVGNPGPTLETSPKLVISEKEVYYEYELLDQSAFFVYILTPSGTGKSLYWTTETRTAHVVSTGEQDQCEDYAFCGNNSICSYDGNHPSCECLRGYVPKSPEQWNISVWSNGCVPKNKSTCENSHTDGFIKYTYMKLPDTSSSSFNTTMNLNECHNSCLGNCSCTAYANLDVRGGGSGCLLWLDNLVDMRSFSQWGQDFYVRVPASELDHAGQGNLKKMIVGITVGVTIFGLLISCVCIFIIKNPGAARRIFNRHYRTIVPRKEEIDLPTFDMSVLVNATENFSTRNKLGEGGFGPVYKGTLIDGKEIAVKRLSNKSEQGLDEFKNEVALISKLQHRNLVKLFGCCIEGEENMLIYEYMSNKSLDYFVFDETKRKLLDWHKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNILLDENLDPKISDFGLARSFLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVFSYGVIVLEIISGKRNSEFLDPWHDNNLLGYAWRLWTEDRALELLDEVLEEVYCVPFEVIRCIEVGLLCVQQRPEDRPDMSSVVLMLNGEKLLRKPKAPGFYTEVDVSSHANSSSAILKPNSHNQLSITIIGNSLDSLAVSESIQDGKTLVSAGGITEAGFFSPGNSTRRYLGIWYANVSPFTVAWVANRNSPLENKSGVLKLNEKGILVLLDATNNTIWSSSNISSKAGNDPIAQLLDSGNFVVKKGQETNGVLWQSFDYPGDTFMPGMKLGWDLETGLERFVSSWKSVDDPAEGEYALKMNLSGYPQMMMFKGPDKEFRAGSWNGLSLVGNPGPTYGTTPRFVLNEKEVYYEYGIEDSSWFIVYKVTPSGGQILYWTTQTRNQQVVSNGEQDRCENYAFCGANSICNYDGSHPSCECLRSYVPKSSDQWNISIWLNGCVPRNKSNCTNSYTDGFLKYTHMKLPDTSSSRFDATMTLDECQQSCLMNCSCTGYASLNVLDGGSGCLLWFNDLVDMRSFSKWGQDFYIRVPAEELDRGKDKKSIVRIIVGVTIFGLIICVCILGIKKSGAARKFCNKHYKNMQRREDTDLPTFDFAVLASATGNFSIENKLGEGGFGPVYKGTLIDGKELAVKRLSQKSWQGLDEFKNEVALMTKLQHRNLVKLLGCCIEGEEKMLIYEYMPNHSLDYVVFDESKRKLLDWRKRFNIITGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARLFLGDQVEAKTNRVAGTYGYMPPEYAVHGHFSVKSDVFSYGVIVLELLSGKKIREFSDPEHCNNLLGHAWKLWTEDRVLELLDEVLEEQCTLFEVIRCIQVGLLCVQQRPDHRPDMSSVVLMLNGDKLLPKPNVPGFYIEFDVTCKANSSSANHKPLSDNELSITILDAR* | 1610 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac11g02073 | 1609 | ProSiteProfiles | Bulb-type lectin domain profile. | 821 | 944 | IPR001480 | - | |
| Phac11g02073 | 1609 | Pfam | D-mannose binding lectin | 869 | 974 | IPR001480 | - | |
| Phac11g02073 | 1609 | Pfam | D-mannose binding lectin | 70 | 176 | IPR001480 | - | |
| Phac11g02073 | 1609 | FunFam | - | 1367 | 1571 | - | - | |
| Phac11g02073 | 1609 | SUPERFAMILY | Protein kinase-like (PK-like) | 1275 | 1573 | IPR011009 | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | Protein kinase domain profile. | 1291 | 1568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac11g02073 | 1609 | Pfam | S-locus glycoprotein domain | 1006 | 1113 | IPR000858 | GO:0048544 | |
| Phac11g02073 | 1609 | Pfam | S-locus glycoprotein domain | 211 | 318 | IPR000858 | GO:0048544 | |
| Phac11g02073 | 1609 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 870 | 979 | IPR036426 | - | |
| Phac11g02073 | 1609 | Gene3D | Hepatocyte Growth Factor | 1133 | 1213 | - | - | |
| Phac11g02073 | 1609 | Gene3D | Hepatocyte Growth Factor | 338 | 418 | - | - | |
| Phac11g02073 | 1609 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 773 | IPR011009 | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | Bulb-type lectin domain profile. | 22 | 146 | IPR001480 | - | |
| Phac11g02073 | 1609 | SMART | blect_4 | 827 | 948 | IPR001480 | - | |
| Phac11g02073 | 1609 | SMART | blect_4 | 28 | 152 | IPR001480 | - | |
| Phac11g02073 | 1609 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 71 | 181 | IPR036426 | - | |
| Phac11g02073 | 1609 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1412 | 1424 | IPR008271 | GO:0004672|GO:0006468 | |
| Phac11g02073 | 1609 | CDD | PAN_AP_plant | 1131 | 1217 | - | - | |
| Phac11g02073 | 1609 | FunFam | - | 577 | 782 | - | - | |
| Phac11g02073 | 1609 | SMART | ntp_6 | 342 | 421 | IPR003609 | - | |
| Phac11g02073 | 1609 | SMART | ntp_6 | 1137 | 1216 | IPR003609 | - | |
| Phac11g02073 | 1609 | CDD | STKc_IRAK | 1297 | 1564 | - | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | Protein kinase domain profile. | 501 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 816 | 945 | - | - | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 466 | 576 | - | - | |
| Phac11g02073 | 1609 | CDD | B_lectin | 827 | 948 | IPR001480 | - | |
| Phac11g02073 | 1609 | Pfam | Protein tyrosine and serine/threonine kinase | 503 | 771 | IPR001245 | GO:0004672|GO:0006468 | |
| Phac11g02073 | 1609 | Pfam | Protein tyrosine and serine/threonine kinase | 1292 | 1560 | IPR001245 | GO:0004672|GO:0006468 | |
| Phac11g02073 | 1609 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 2 | 760 | - | - | |
| Phac11g02073 | 1609 | CDD | PAN_AP_plant | 336 | 422 | - | - | |
| Phac11g02073 | 1609 | SMART | serkin_6 | 1291 | 1543 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac11g02073 | 1609 | SMART | serkin_6 | 501 | 744 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 338 | 421 | - | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | PAN/Apple domain profile. | 339 | 422 | IPR003609 | - | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1256 | 1366 | - | - | |
| Phac11g02073 | 1609 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 622 | 634 | IPR008271 | GO:0004672|GO:0006468 | |
| Phac11g02073 | 1609 | CDD | STKc_IRAK | 507 | 775 | - | - | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 15 | 149 | - | - | |
| Phac11g02073 | 1609 | Gene3D | Phosphorylase Kinase; domain 1 | 477 | 576 | - | - | |
| Phac11g02073 | 1609 | Gene3D | Phosphorylase Kinase; domain 1 | 1264 | 1366 | - | - | |
| Phac11g02073 | 1609 | CDD | B_lectin | 32 | 152 | IPR001480 | - | |
| Phac11g02073 | 1609 | Gene3D | - | 816 | 945 | IPR036426 | - | |
| Phac11g02073 | 1609 | Gene3D | - | 15 | 149 | IPR036426 | - | |
| Phac11g02073 | 1609 | Pfam | PAN-like domain | 1134 | 1202 | IPR003609 | - | |
| Phac11g02073 | 1609 | Pfam | PAN-like domain | 339 | 407 | IPR003609 | - | |
| Phac11g02073 | 1609 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1367 | 1568 | - | - | |
| Phac11g02073 | 1609 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 783 | - | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | PAN/Apple domain profile. | 1134 | 1217 | IPR003609 | - | |
| Phac11g02073 | 1609 | ProSiteProfiles | EGF-like domain profile. | 283 | 320 | IPR000742 | - | |
| Phac11g02073 | 1609 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1133 | 1216 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac11g02073 | Phac-Chr11 | 31023216 | 31033111 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac11g02073 | 430 | 817 | Receptor kinase-like Gene Family | AT4G05200 | 47.922 | 9.33e-112 | 369 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_DLSV | Phac11g02073 | PK_Tyr_Ser-Thr | 2.6e-46 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac11g02073 | - | - | aprc:113865090 | 1930.99 |