Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02069 ATGGATGGGTTATCTTGTGTGTTGTGTGAGAAGCGGGCTATGATGCTGTGTGACTCGGACCAGGCTAAGCTATGCTGGGACTGCGACGAGAAAGTTCACAGCGCGAATTTCTTAGTCGCAAAACATTCCAGGGTTCTGCTCTGTCGTTTGTGTCACTCCCCTACTCCGTGGACGGCTTCAGGCACGAAACTCACGCCTACCGTGTCGTTTTGTCACCGTTGCATCCTGCGTCGACACACGCGGTTGAACCACTTGGTGAATACCGATCAACGGCATCGTGATAGTGTGAACGACGACGAGGAACATGATTTTGATCACGTTCTTGATTATGATAACAGTGATTACATTGAAGAAGAAGGTGAAGAAGAAGATGATGAAGAAGAGGATGAGGATGAGGAAGGAGAAAATCAAGTGGTTCCAATGTCTTCTGGTTCTGCCACGCCACCTCCGAGTGAGGACGATTCAGGTTTAGCTTTGAAGCGGTTAAGAAACATCTCTTCCTTTTGA 507 0.4813 MDGLSCVLCEKRAMMLCDSDQAKLCWDCDEKVHSANFLVAKHSRVLLCRLCHSPTPWTASGTKLTPTVSFCHRCILRRHTRLNHLVNTDQRHRDSVNDDEEHDFDHVLDYDNSDYIEEEGEEEDDEEEDEDEEGENQVVPMSSGSATPPPSEDDSGLALKRLRNISSF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02069 168 MobiDBLite consensus disorder prediction 90 113 - -
Phac11g02069 168 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 150 - -
Phac11g02069 168 CDD Bbox1_BBX-like 6 47 - -
Phac11g02069 168 Pfam B-box zinc finger 5 46 IPR000315 GO:0008270
Phac11g02069 168 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac11g02069 168 MobiDBLite consensus disorder prediction 114 136 - -
Phac11g02069 168 MobiDBLite consensus disorder prediction 90 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02069 Phac-Chr11 30909733 30911595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02069 1 101 C2C2-CO-like Transcription Factor Family AT5G54470 53.465 4.14e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac11g02069 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02069 - - pvu:PHAVU_011G1498000 291.197