Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02068 ATGGATGGGTTATCTTGTGTGTTGTGTGAGAAGCGGGCTATGATGCTGTGTGACTCGGACCAGGCTAAGCTATGCTGGGACTGCGACGAGAAAGTTCACAGCGCGAATTTCTTAGTCGCAAAACATTCCAGGGTTCTGCTCTGTCGTTTGTGTCACTCCCCTACTCCGTGGACGGCTTCAGGCACGAAACTCACGCCTACCGTGTCGTTTTGTCACCGTTGCATCCTGCGTCGACACACGCGGTTGAACCACTTGGTGAATACCGATCAACGGCATCGTGATAGTGTGAACGACGACGAGGAACATGATTTTGATCACGTTCTTGATTATGATAACAGTGATTACATTGAAGAAGAAGGTGAAGAAGAAGATGATGAAGAAGAGGATGAGGATGAGGAAGGAGAAAATCAAGTGGTTCCAATGTCTTCTGGTTCTGCCACGCCACCTCCGAGTGAGGACGATTCAGGATGA 471 0.4904 MDGLSCVLCEKRAMMLCDSDQAKLCWDCDEKVHSANFLVAKHSRVLLCRLCHSPTPWTASGTKLTPTVSFCHRCILRRHTRLNHLVNTDQRHRDSVNDDEEHDFDHVLDYDNSDYIEEEGEEEDDEEEDEDEEGENQVVPMSSGSATPPPSEDDSG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02068 156 Pfam B-box zinc finger 5 46 IPR000315 GO:0008270
Phac11g02068 156 CDD Bbox1_BBX-like 6 47 - -
Phac11g02068 156 MobiDBLite consensus disorder prediction 89 156 - -
Phac11g02068 156 SMART bboxneu5 1 47 IPR000315 GO:0008270
Phac11g02068 156 MobiDBLite consensus disorder prediction 114 136 - -
Phac11g02068 156 MobiDBLite consensus disorder prediction 89 113 - -
Phac11g02068 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 148 - -
Phac11g02068 156 MobiDBLite consensus disorder prediction 138 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02068 Phac-Chr11 30909733 30911467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02068 1 101 C2C2-CO-like Transcription Factor Family AT5G54470 53.465 4.65e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02068 - - pvu:PHAVU_011G1498000 288.5