Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02060 ATGGCATTAACTTCTTCTACTCTCGCATCCTTCACATCATTCCTTTGCCTTTTTATGTTTTGTGTTAATGCAGTCACCTACAAAGAATTTTTACAAATAGGACAATCATTGGGAACCTCAGACTCCGTTGCTTCTGATAGCGGGAAGTTCGAATTGTGCTTTTTCACCAGAGTCAGAGACAACTCCACCAAGTACTACGTTGGTATACGGTATAAAAGGGTTCCAAACGACAAGAACAAGATTGTGTGGGTTGCTAACCGAGACTACGCACTTGAAACATCCTCGGCAGTTCTCACCATTCAACCTGATGGAAATTTTGTGATCATGGATGGACAAGTTGCATACCGTGTCAACAAGGTTTCAAACAATTTTAGTACCTATGCCATGCTCTTGGATTCAGGAAACTTGTTACTGCTGAAAACCTCAAATAAAGAGATTTTGTGGCAGAGTTTTGATTATCCTACGGACACCCTTTTACCCGGAATGAAATTAGGACAAGATGAAGGTTACAACACTACTTGGTCATTGCGATCATGGATAAGTGCAGATGACCCTGCCCCAGGAGCTTTTACCCTCCAGTATGATTCGGGCAGGGTCAATCTAATCATCGACAATGGTTCTAATGTGTTCTGGATTGACGACAGTTACAATGAAACTATTGTCAATGTTATTAGCCGAACTGGTGTGGAAGAGCACTACCGCTATTTCACTCTTCCAGTTGGTAAGGACTCTAGGCTGGTACTAGAAGTGTCTGGGGAGCTCAACCAGGAGTATTGGTTAGATGAAGCAAAACTTTGGGTTTCTAATCAGTCATCCAAGTGTGGAACTAAGAATTCGTGTGGAGCTTTTTCCATCTGTAACCCGAAAGCTCTTCACCCTTGTGACTGTACTGATGGTTTCAGACCGTTTGATGCTGATTCTTGGAACAAAGGGTACAAATCCGCTGGCTGTGTCCGGAAAAAAGAGTTATCGTCCTGCAGTAACGGTGTTGAATCCAACGATAAATTCAAGCAACTCTATCATGTGAAATGGCCACCTACTCCGGACAGTTACAAGACCCTAAAGATCGACACAGCAAGAGGGTGTGAACGTACTTGTTCTACAAATTGTTCTTGTGTTGCTTTTGCTTACTATTTGAACGGTAACTGCCAGTTGTGGCTTGGTTCGGTACTGAATCTAAAGAACGTCTCAACAGATGTGGACAATTCTGATGATAGCAATCCAATTTTTTACCTAAGACTTGCTGCCTCAGAATTCGTTACTTCTGATTCAAACGCAACAAGAGATAAAGAACCAGAAAATAATGTTAGGAAGAATCTACTTGTGATTGTTATACTGATCTCCCTTCTAACTTCTCTTATATTGGGCTTATTAGTTCACTGGATTAGAAGGAAGAGGAGAAAAGGGGAAGATTTGCTCCATTTTGATATAGGCATGAGCATGAAAGTTGAAGATTCAGAGCTTACTGAAGCACATAGGAGTGAGAAAGTGAAGAAGGAAGTCAAATTGCCATTATTCAGTTTCCAGAGCGTTGCAGCTGCAACTGATAATTTCTCACATGCCAATAAACTTGGTGAGGGTGGCTTTGGACCCGTTTACAAGGGTATATTATTCAATGGGGATGAGGTTGCTGTGAAAAGACTGTCACGGAGATCTGGTCAAGGATGGGAAGAGTTGAGAAATGAAGCCTTGTTAATTGCAAAACTCCAATACAACAATCTTGTTAGACTTCTTGGTTGCTGCATTGAACGAAATGAAAAGATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTACTGATGAAAAAAAACGGATGCTAGATTGGCGAACAAGAGTCAGAATAATTGATGGGATTGCCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTGGACACCAATATGAATCCCAAGATATCAGATTTTGGAATGGCAAAAATATTTGGTGAAAATGAACTTCAAGCAAATACAAACAGAATAGTTGGAACATATGGTTACATGGCACCTGAATATGCTTTGGAAGGACTTTTCTCAATAAAATCGGACGTGTTTAGTTTTGGGGTCCTTTTGTTGGAGATTATAAGTGGCAAGAAGAATACTGGCTTTTATCAAACCAGTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACAAGCAATTCAGGAATGGACCTAATGGATACTGCACTAGATGATAGTGATCCTAGTAGTAATTGTATGCATACTGTGCCAAGATATGTGAACATGGGACTTCTTTGCGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACACTGTACCCCTTCCTTCTCCTAAACCACCAGCATTTCTAAAGTTGAGAGGTGATGAAAGTTCAAAACTGCCCTGCAGAATCACAGAAAGCTTATCAGTGAATGTTATGACAGATACAATTGTGCAAGCAAGATGA 2520 0.4036 MALTSSTLASFTSFLCLFMFCVNAVTYKEFLQIGQSLGTSDSVASDSGKFELCFFTRVRDNSTKYYVGIRYKRVPNDKNKIVWVANRDYALETSSAVLTIQPDGNFVIMDGQVAYRVNKVSNNFSTYAMLLDSGNLLLLKTSNKEILWQSFDYPTDTLLPGMKLGQDEGYNTTWSLRSWISADDPAPGAFTLQYDSGRVNLIIDNGSNVFWIDDSYNETIVNVISRTGVEEHYRYFTLPVGKDSRLVLEVSGELNQEYWLDEAKLWVSNQSSKCGTKNSCGAFSICNPKALHPCDCTDGFRPFDADSWNKGYKSAGCVRKKELSSCSNGVESNDKFKQLYHVKWPPTPDSYKTLKIDTARGCERTCSTNCSCVAFAYYLNGNCQLWLGSVLNLKNVSTDVDNSDDSNPIFYLRLAASEFVTSDSNATRDKEPENNVRKNLLVIVILISLLTSLILGLLVHWIRRKRRKGEDLLHFDIGMSMKVEDSELTEAHRSEKVKKEVKLPLFSFQSVAAATDNFSHANKLGEGGFGPVYKGILFNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQYNNLVRLLGCCIERNEKMLIYEFMPNKSLDLFLFTDEKKRMLDWRTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMAKIFGENELQANTNRIVGTYGYMAPEYALEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTSSFNLLGYAWDLWTSNSGMDLMDTALDDSDPSSNCMHTVPRYVNMGLLCVQESPEDRPTMSDVVSMIGNDTVPLPSPKPPAFLKLRGDESSKLPCRITESLSVNVMTDTIVQAR* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02060 839 Pfam PAN-like domain 330 392 IPR003609 -
Phac11g02060 839 SMART blect_4 28 154 IPR001480 -
Phac11g02060 839 CDD STKc_IRAK 524 792 - -
Phac11g02060 839 Gene3D Phosphorylase Kinase; domain 1 491 593 - -
Phac11g02060 839 SMART ntp_6 331 406 IPR003609 -
Phac11g02060 839 PIRSF SRK 1 839 IPR024171 GO:0004674
Phac11g02060 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 119 813 - -
Phac11g02060 839 Pfam Domain of unknown function (DUF3403) 794 839 IPR021820 GO:0004674
Phac11g02060 839 Pfam Protein tyrosine and serine/threonine kinase 521 791 IPR001245 GO:0004672|GO:0006468
Phac11g02060 839 ProSiteProfiles PAN/Apple domain profile. 326 415 IPR003609 -
Phac11g02060 839 Pfam D-mannose binding lectin 81 179 IPR001480 -
Phac11g02060 839 ProSiteProfiles Protein kinase domain profile. 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02060 839 SUPERFAMILY Protein kinase-like (PK-like) 501 791 IPR011009 -
Phac11g02060 839 SMART serkin_6 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02060 839 CDD PAN_AP_plant 324 415 - -
Phac11g02060 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Phac11g02060 839 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Phac11g02060 839 FunFam Uncharacterized protein 493 593 - -
Phac11g02060 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Phac11g02060 839 Gene3D Transferase(Phosphotransferase) domain 1 594 797 - -
Phac11g02060 839 Gene3D - 23 151 IPR036426 -
Phac11g02060 839 Pfam S-locus glycoprotein domain 226 302 IPR000858 GO:0048544
Phac11g02060 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02060 Phac-Chr11 30753657 30757492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02060 432 808 Receptor kinase-like Gene Family AT4G23190 50.000 3.81e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02060 PK_Tyr_Ser-Thr 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02060 - - pvu:PHAVU_011G149500g 1421.37