Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02054 ATGGAGCAGGAGATGGAAAACATAGAGTCTCAAGCTTCTTACAAAGTAACAGTACAAGAGGAAGCACGTGACATCTTTGGCAAGGGAAATTCTTCAGTAACTCTAAAGTTCCACGATGTTATCTATAAAATTAAGAACAGAAAGTGGGGATTTCTGAAGAACACAGTAGAAAAGAAAGTGGTTCTGAATGGAGTGACAGGCATGGCTCAACCTGGTGAAATTCTTGCCATGTTAGGTCCTTCTGGGAGTGGCAAAACAACTTTGCTAGCAGCATTGGGAGGCAAGCTTGGAGGGAAACTCCATGGAAGCATAACATATAATGGCAAAGCCTTCTCAAATGCAATGAAGAGGAACACAGGTTTTGTGACACAAGATGATGTTCACTATCCCCACTTGACTGTGACTGAAACTCTAGTGTTCACAGCCCTTCTTAGATTGCCAAGCAGTTTATCCAAAAAGGAGAAAATTGTGCATGCAAAAGCTGTGATGGCTCAACTTGGTTTAACCAAGTGCAAGGACAGCATCATTGGAGGCCCACTGCTGAGAGGTGTTTCTGGTGGGGAGAAAAAAAGGGTTAGCATTGGACAAGAAATGCTCGTAAACCCAAGCTTGCTATTTCTGGATGAGCCAACCTCTGGCCTAGACTCAACAACAGCTCAAAGAATTGTCTCAATTTTGTGGGAGCTAGCAAATGGAGGGAGAACTGTTGTGATGACCATACATCAACCTTCAAGTAGGATTTACTGCATGTTTCACAGGGTGTTACTGCTTTCAGATGGGAACCTACTGTATTATGGAAACGGGTCTGAAGCTATGGAATATTTTACTAATATTGGATATGCCCCTACCATGGCATTGAACCCCTCAGATTTTCTTTTGGATCTTGCAAATGGTGTCTACACTGGTCAATCGAATGAGGACCAAGCCTTAAATAAAAATAAATTGATTTCTGCGTATAGGAACTACTTTGATGTCAAATTTAAGCCAGTAATGCAAGATATTCCTGAGTACGATAAAAGTCAGGGTAGATTTGAAGGCAATGGATTTGGGGAATGGCCTACCAGTTGGTCACAGCAGTTTCTTGTACTGCTAAAAAGAGATGTCAAAGAGAGAAAATATGCATCATTCTCTGGCCTGAGGGTTTGTCAATTTCTTGTGGTTGCTCTTATTACAGGATTACTATGGTATAAGTGTGATATTTCACGCTTGCAGGACCAGACTGGAATTCTATTCTTCCTTACTAGCTTTTGGGGTGGCATGCCTCTCTATCAAGCAATATTCACCTTCCCACAAGAGCTAATAATGCTGGAGAAGGAACGATCCTCTGGAATGTACAAGCTCTCTTCATACTTCATGTCAAGGATGGTGGGTGACCTGCCAATGGAGCTTGTGCTTCCTTCCATATTCCTTACCATAATCTATTGGATGATAGGGTTGAAAAACAATGTGGTAAACTTCTTTTGCACACTTCTCACTATCTTACTCGATGTGTTGGTTTCACAAGGACTAGGCCTTGCCATTGGTGCTATTGTAATGGACCAGAAATCCGCAACCACACTGGCCTCAGTCATTGTGCTTACTTCTGTTCTGGTTAGTGGATACTATATTCAACATGTGCCAAAATTTGTAGCATGGCTCAAGTACTTCTCCATTAACTACTACATATACCATCTCCTGATCGGGTCTCAATATGGCTCAAGTGACACATACCCATGTCATCAAGGACAGTGTTTGGTTGCAGAATATCCTTTGATAGAGCAAATGGGACTACATTTGCAAGGGAAAATTATGTCAGCACTGGCTCTATTCATAATGTTGATAGGATACAGGCTCATGGCTTATTTGGCTTTGATGAAGATTGGGATGACAAAGAAACTGGGGTAG 1884 0.4183 MEQEMENIESQASYKVTVQEEARDIFGKGNSSVTLKFHDVIYKIKNRKWGFLKNTVEKKVVLNGVTGMAQPGEILAMLGPSGSGKTTLLAALGGKLGGKLHGSITYNGKAFSNAMKRNTGFVTQDDVHYPHLTVTETLVFTALLRLPSSLSKKEKIVHAKAVMAQLGLTKCKDSIIGGPLLRGVSGGEKKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRIVSILWELANGGRTVVMTIHQPSSRIYCMFHRVLLLSDGNLLYYGNGSEAMEYFTNIGYAPTMALNPSDFLLDLANGVYTGQSNEDQALNKNKLISAYRNYFDVKFKPVMQDIPEYDKSQGRFEGNGFGEWPTSWSQQFLVLLKRDVKERKYASFSGLRVCQFLVVALITGLLWYKCDISRLQDQTGILFFLTSFWGGMPLYQAIFTFPQELIMLEKERSSGMYKLSSYFMSRMVGDLPMELVLPSIFLTIIYWMIGLKNNVVNFFCTLLTILLDVLVSQGLGLAIGAIVMDQKSATTLASVIVLTSVLVSGYYIQHVPKFVAWLKYFSINYYIYHLLIGSQYGSSDTYPCHQGQCLVAEYPLIEQMGLHLQGKIMSALALFIMLIGYRLMAYLALMKIGMTKKLG* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02054 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 614 - -
Phac11g02054 627 Gene3D - 45 278 IPR027417 -
Phac11g02054 627 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Phac11g02054 627 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524|GO:0016887
Phac11g02054 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 284 IPR003439 GO:0005524
Phac11g02054 627 Pfam ABC-2 type transporter 358 563 IPR013525 GO:0016020|GO:0140359
Phac11g02054 627 SMART AAA_5 71 261 IPR003593 GO:0016887
Phac11g02054 627 FunFam ABC transporter G family member 22 51 278 - -
Phac11g02054 627 Pfam ABC-2 type transporter 241 311 IPR043926 GO:0140359
Phac11g02054 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02054 Phac-Chr11 30725335 30728966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02054 69 287 Calmodulin-binding Proteins AT2G36910 25.106 5.75e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02054 K05681 - gmx:100812397 1012.29