LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g02041	ATGGTGAAGATGGAACTCATGAGATGGGTTCCCTGGGTCTTGGTTGTTGTTTTGCTAGTTTTGGTTAATGGGTCATTTTCCTTATACACTCCTCCTGATAGCTATCTAATTGCATGTGGTTCTTCTCAAAACATCACCTTTCAAGGTCGCACTTTTGTTCCCGATTCACAGCATTCTTCACTTGTAATGAAAACTGGGAATTCTTTTGTTGCTAGCACCAATTCTACTGCCCCTTTTCCCATTTACCAATCGGCTCGGGTTTTCACCGAGAAAGCTTCTTATAGGTTTGAGATTCAGCAAGAAGGTAGGCACTGGGTTAGGCTATACTTTTCCCCTATTCCAAACTCCAGCCACAACTTGACTTCAGCTTCTTTAACAGTGGTTACTGATGATTTTGTACTCTTGAGCAACTTCACCTTTAGGAAATACAACGATTCTTATATGTTCAAGGAGTATGCAGTCAATGTTACCTCTGATATATTGCTTGTCACCTTCATTCCTTCGAATGGTTCGGTAGCCTTTGTGAATGGAATTGAAGTTGTGTCAATGCCGAATGAGTTGTTTGTTGATCAGGCACTCGCAGTTAACCCGCCAGCACCATTCAATGGACTTTCTGAACTTGCCTTTGAAACTGTTTATCGCTTGAATATGGGGGGTCCTTTGATTACTTCTGAAAATGACACCCTGGGTAGGAGTTGGGTGAATGATAGGAAGTACCTTCATGTGAACAGCTCTGTCCTTAATGTGTCCGTGAATCCTTCGAGCATTAAGTATCCGGTGGCTGTTAGACCTGAGACGGCCCCAAATTGGGTCTATGCCACTGCTGAAGCAATGGGAGATGCTAATGTAAATGATCCCAATTTCAACATTACTTGGGTCTTCAATGTGGATCCAAATTTCTCCTATTTCATCCGGGCACACTTTTGTGATATTATGAGCAAGTCACTTAACACTTTAGTGTTCAATATGTTCATAAATTCTAACATAGCTCTTCAGAGCCTTGATCTCTCTACCATGACTAATGACTTGGCTGTGCCTTACTACAAGGACTTTGTTGCCAATGCCTCAGCAGGCACTAACACTTTGACTGTGAGTGTTGGTCCAGATCCTGTGGCAGACTTTCCAAATGCCACTATGAATGGGTTGGAGATAATGAAGATCAGCAACTCATTGAAGAGCTTGGATGGGCTTTATTCAGTTGACAGTCTTCTTCCAAGTTCACATTCAAAGAAAAGCATGGTAGGAGTAATTGTTGGTTCTGCTGTTGGGGCCCTAGCTGCTGTAGCGATAGCTGGTTTGTGTTATGGCTGCCTGGTGAGACGCAAATCAAAGTCACCCACTCAACAGGGCCATTCATGGCTGCCTCTGCCCCTTTATGGAAACTCTCTTACCATGACGAAAAATTCAACACTTTCACAGAAGAGTGGAACCGCAAGTTGCATTTCTTTAGCTTCATCAAATCTTGGACGATTCTTCAATTTCCAGGAAATCCTAGATGCTACAAACAAATTTGATGAGAAGCTACTTCTCGGTGTTGGTGGTTTTGGAAGGGTTTACAAAGGAACGCTTGAAGATGGGACAAATGTAGCTGTCAAAAGAGGTAACCCAAGATCTGAGCAAGGCCTTGCAGAATTCCGGACAGAAATTGAAATGTTATCCAAGCTTCGCCATCGCCATCTTGTGTCCCTCATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAACGGACCCCTCCGGAGTCATTTGTATGGAACAGACCTGCCACCTCTCTCATGGAAGCAGCGGCTCGAGATCTGCATTGGAGCAGCAAGAGGCCTTCATTATCTCCACACCGGAGCAGCTCAAAGCATAATTCACCGAGATGTAAAGACAACAAATATCCTCTTGGATGAGAACTTTGTTGCCAAAGTTGCTGATTTTGGCCTCTCCAAGACTGGTCCTGCTCTTGATCAGACCCATGTGAGCACTGCTGTTAAGGGTAGTTTTGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACTGAAAAATCAGATGTGTATTCATTTGGGGTAGTGTTGATGGAAGTGTTATGCACAAGGCCAGCCTTGAACCCTGTCCTTCCAAGGGAGCAGGTCAACATAGCTGAATGGGCAATGGCCTGGCAGAAAAAGGGTATGCTTGATCAAATCATGGATCAAAATCTTGTTGGCAAGGTGAATCCTGCATCACTTAAGAAGTTTGGGGAGACAGCCGAGAAGTGCTTGGCCGAGCATGGTGTGGACCGGCCGTCTATGGGAGATGTTTTGTGGAATCTTGAATATGCATTGCAGCTTCAAGAGACATCATCAGCCCTCATGGAGCCTGAAGATAACAGCACAAACCACATAACCGGAATTCAGTTGACACCCCTAGACCATTTTGATAACAGTGTGAGTATGGTTGATGGGGGCAACTCTTGCACAGATGATGATGCAGAAGATGCTGCTACAAGTGCAGTGTTCTCTCAATTGGTAAATCCTCGCGGAAGATAA	2538	0.4409	MVKMELMRWVPWVLVVVLLVLVNGSFSLYTPPDSYLIACGSSQNITFQGRTFVPDSQHSSLVMKTGNSFVASTNSTAPFPIYQSARVFTEKASYRFEIQQEGRHWVRLYFSPIPNSSHNLTSASLTVVTDDFVLLSNFTFRKYNDSYMFKEYAVNVTSDILLVTFIPSNGSVAFVNGIEVVSMPNELFVDQALAVNPPAPFNGLSELAFETVYRLNMGGPLITSENDTLGRSWVNDRKYLHVNSSVLNVSVNPSSIKYPVAVRPETAPNWVYATAEAMGDANVNDPNFNITWVFNVDPNFSYFIRAHFCDIMSKSLNTLVFNMFINSNIALQSLDLSTMTNDLAVPYYKDFVANASAGTNTLTVSVGPDPVADFPNATMNGLEIMKISNSLKSLDGLYSVDSLLPSSHSKKSMVGVIVGSAVGALAAVAIAGLCYGCLVRRKSKSPTQQGHSWLPLPLYGNSLTMTKNSTLSQKSGTASCISLASSNLGRFFNFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMAWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLDHFDNSVSMVDGGNSCTDDDAEDAATSAVFSQLVNPRGR*	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac11g02041	845	FunFam	Putative receptor-like protein kinase	34	184	-	-
	Phac11g02041	845	FunFam	Receptor-like protein kinase FERONIA	208	389	-	-
	Phac11g02041	845	SUPERFAMILY	Protein kinase-like (PK-like)	483	775	IPR011009	-
	Phac11g02041	845	ProSitePatterns	Protein kinases ATP-binding region signature.	510	532	IPR017441	GO:0005524
	Phac11g02041	845	SMART	serkin_6	504	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac11g02041	845	Pfam	Protein tyrosine and serine/threonine kinase	509	771	IPR001245	GO:0004672\|GO:0006468
	Phac11g02041	845	ProSiteProfiles	Protein kinase domain profile.	504	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac11g02041	845	Gene3D	-	34	184	-	-
	Phac11g02041	845	Gene3D	-	207	388	-	-
	Phac11g02041	845	Gene3D	Phosphorylase Kinase; domain 1	463	579	-	-
	Phac11g02041	845	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	624	636	IPR008271	GO:0004672\|GO:0006468
	Phac11g02041	845	Pfam	Malectin-like domain	37	387	IPR024788	-
	Phac11g02041	845	PANTHER	OS07G0166700 PROTEIN	490	781	IPR045272	GO:0004714\|GO:0006468
	Phac11g02041	845	FunFam	receptor-like protein kinase FERONIA	466	579	-	-
	Phac11g02041	845	Gene3D	Transferase(Phosphotransferase) domain 1	580	799	-	-
	Phac11g02041	845	PIRSF	SRK	27	167	IPR024171	GO:0004674
	Phac11g02041	845	PIRSF	SRK	373	811	IPR024171	GO:0004674
	Phac11g02041	845	FunFam	Receptor-like protein kinase FERONIA	580	796	-	-
	Phac11g02041	845	CDD	STKc_IRAK	510	775	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac11g02041	Phac-Chr11	30328716	30332387	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g02041	15	845	Receptor kinase-like Gene Family	AT3G46290	53.025	0.0	848

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Phac11g02041		Malectin_like	4.5e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g02041	-		-	gmx:100809700	1532.69