Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02030 ATGAGAGGACACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCACATTTCTCCATCCGCAGTATCAAGCACAGCCTGTGCAAGAGATGAGAGGACACTCCATCAACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCACATTTCTCCATCCGCAGTATCAAGCACAGCCTGCGCAAGAGATGAGAGGACACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCCTTTCTTCAGTGCACGTGACAACGCCTCCACACTGGAGGAATCTTCCTCCTCAAGCCTTTCTTCAAGATGATGATGTTCCTTGGTTGGGTGAACATGACAGTGATATGCAGTTGGACATTGAGGACATGTCATATGAGGAGCTTCTTGAATTAGAATACTTGTGCATGATTTCACAGGATGAATATAAGAACAAGCAGGAAATTGGAATTCTTCAATGTGGAGATGGATATCACGCAGATTGTATAAGGACATGGTTACACGAGAAAAATGTTTGTCCCTTATGCAAATCAGAAGCATTGACTCTTGGATAG 576 0.4358 MRGHSIDFHPPLTLPTNPSSTFLHPQYQAQPVQEMRGHSINFHPPLTLPTNPSSTFLHPQYQAQPAQEMRGHSIDFHPPLTLPTNPSSLSSVHVTTPPHWRNLPPQAFLQDDDVPWLGEHDSDMQLDIEDMSYEELLELEYLCMISQDEYKNKQEIGILQCGDGYHADCIRTWLHEKNVCPLCKSEALTLG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02030 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 188 IPR013083 -
Phac11g02030 191 MobiDBLite consensus disorder prediction 1 23 - -
Phac11g02030 191 Pfam RING-H2 zinc finger domain 141 184 IPR024766 GO:0008270
Phac11g02030 191 ProSiteProfiles Zinc finger RING-type profile. 143 184 IPR001841 -
Phac11g02030 191 SUPERFAMILY RING/U-box 142 187 - -
Phac11g02030 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 142 188 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02030 Phac-Chr11 30062161 30063130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02030 123 188 C3H Transcription Factor Family AT2G15530 33.654 1.06e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02030 - K19041 pvu:PHAVU_011G149000g 276.944