Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02024 ATGGACAGCACCGAAGACTCATCCACCAGTTCACAACAACAACCAAACCTCCCACCCGGGTTTCGGTTCCACCCCACAGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAAGTTGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTCAGTCCAAGAGATAGGAAGTACCCAAATGGCGCGAGGCCAAACAGAGCTGCAACTTCAGGGTACTGGAAGGCCACTGGGACAGATAAGCCCATATGCAGTGGAATTCAAAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGAGGGAAGCCACCAAAAGGGGTAAAAACCGATTGGATCATGCATGAGTATCGTCTCGCTGAAACCAAGCCTAACAACAGGCCTCCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGGATCTACAAGAAGGGCAACACACAAAGGTCACCTATGGACCATGAGAGGGATGATTCCATGGATGACATGATTGGAGAAGTACCTCCTTCCATCAACGTGGGCCACATGAATGCGAGATTTCACCTTTCAAAGATGTCTACGAGCTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTGTGAATGGGATCAGCACTACTACAAGTGCCATGCCATCTCAGTTTGGCACTTCAAACTCCAAGGCAGTTCACCTTCCTTTTGCCCTTTCAAACAACACTTCAGCCTCCAAAAGAACACTCTCAACACTGTATAACTGGAATGATGATAGTGATGAGAAGCACTTCAATTTGGACTGTAATGGGAATGTGAGTGTTGTGAGGACTGAAGACAACAATGCTACTCCTGGCTCCTTTGCTACTCTGCTTAACCAGCTACCACAAACACCTTCATTGCCTCAAATAGGGTCTATGGGAGATGGGTTACTTAGGACACAATATCAAATACAAGGAACTAATTGGTATGGTTAA 1071 0.4641 MDSTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGIQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSPMDHERDDSMDDMIGEVPPSINVGHMNARFHLSKMSTSYSGALLENDRNTLEGVVIGNGVNGISTTTSAMPSQFGTSNSKAVHLPFALSNNTSASKRTLSTLYNWNDDSDEKHFNLDCNGNVSVVRTEDNNATPGSFATLLNQLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02024 356 PANTHER NAC TRANSCRIPTION FACTOR 56 17 218 - -
Phac11g02024 356 MobiDBLite consensus disorder prediction 1 22 - -
Phac11g02024 356 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Phac11g02024 356 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Phac11g02024 356 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Phac11g02024 356 FunFam NAC transcription factor 56 26 181 - -
Phac11g02024 356 MobiDBLite consensus disorder prediction 1 19 - -
Phac11g02024 356 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02024 Phac-Chr11 29942382 29945674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02024 1 355 NAC Transcription Factor Family AT3G15510 53.684 3.49e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac11g02024 NAM 2.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02024 - - gmx:100811670 605.134