Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02011 ATGGGTATTATTCTTACTTTTTCTATAATATTTGCATGCATACTTGTTTTCTCACTTAAAATTTCCGTAGCAAATGATTCAATCAACGTGCTCCAGTCTCTGAGTGATGGGAAGACTTTGGTATCAAAAGGTGGAAAGTTTGAACTAGGGTTCTTCAGCCCTGGTAGTTCCCAGAAACGATACTTGGGAATTTGGTACAAGAATATCCCAGATAAGACATTTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGCATCTTAACAGTGAACACCACAGGCAATCTTGTTCTTACTCAAAATGGTTCTCTTGTTTGGCACACCAACTCTCAGAAACAAGCACAGAATCCGGTGGTAGAAATGTTGGACAGTGGCAATCTTGTGATCAGAAACGAGGGGGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACTGGTTTGGAACGGAAATATACTGCGTGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTGTCTCGGGTTATGAAACTCTACAGCTATCCTGAGATTTATATGATGAAGGGTACACAAAAGTTGATGAGGTATGGACCTTGGAATGGCGAATATTTCAGCGGAATGCCAGATCTGCTGAATAACACCATTTTTGGCTTGAGTTATGTCAGCAATGAAGATGAGATTTACTACACCTATACACTCGTGAATGATTCTGTCATCTCCAGAACTGTAACAAACCAATCAGCTACTATTGTTCGTTATGTATGGCAGGAGGTTGAGAAAATATGGAAAATATATAGATCCTACCCGAAAGAGTTTTGCGACAAGTACGACTCCTGTGGACCCAACGGATTATGTGTACGAACTCAGGCACAATCTTGCATATGTCAGAAAGGTTTCAGTCCAAAATCACCACAAAATTGGAACTCATCGGATTGGAGTGGAGGATGTGTGCGCAATAAAGCGTTGAGTTGCAGGGATGATAGGTTTGTCAAATATAAAGGGCTGAAAGTTCCAGCTACTACAAATACTTGGTTGAATAAGAGTCTTGGCCTCAAGGAATGCGAAGTGAAGTGTTTGAATGATTGTTCTTGTATGGCCTACACTAATTCAGATATAAGAAATGGAGGCAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAAGAGATTGAAACTGGTGGGCAAGACCTGTATATCAGGATGAATGCTTCGGAGGCTGAACCTGTACCAAGCAACAACAACACACGAAAGATAGTCGCTTCAACGGTTGCTCCAATTTCTGGTTTTCTTATTCTTCTGATTACTTGTATCATTTGCAGGCTTCATAGGAACAATGCTGGAAATTCATCAACAGAAGATAACAACAATAAGAGACATGTGGATGATCTGGACGTCCAAATGTATGATCTTGTAACAATTGTAAAGGCCACTAATAACTTCTCCACAGAGAATATCATAGGAGAAGGTGGTTTTGGACGTGTATACAAGGGAATAATCGACAGCCAAGAAATTGCTGTGAAGACTCTATCAAGGAACTCATGGCAAGGTGTAACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAGCTTCAGCATCGGAATCTTGTCAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCCCTCATTTTTGGTGACAAAAGCAGTAAATTGCTGGAGTGGCCTCAACGATTCCAAATAATTTGCGGAGTTGCAAGGGGCCTTATGTACCTTCATCAAGATTCACCACTGAGGATCATCCACAGAGATCTCAAAGCTAGTAACATCTTACTCGATAAAACGTTGAATCCGAAGATATCAGATTTTGGTGTATCAAGATCTTTTGGAGTAGACCAACTTGAAGGAAGCACAAGTAGAGTAGTAGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTATTTTCTGAAAAATCTGACGTCTTTAGCTTTGGCATTCTGGTGTTGGAGATTATTTGTGGGAAGAGAAATAGAGGACTTTATCAACAGACAAGAATCTTAAACCTTGTTGCTCATTCATGGACATTATGGAAAGCGGGCAAGGGAATAGATTTGATTGCCTCAAACATGAAGATGTCATCGTGCGTTATATCTGAAGTACTGCGTTGTCTCCATGTCAGTCTTTTGTGTGTGCAACAGTACCCAGATGATAGGCCTACAATGATGTCAGTGATTCTGATGTTGGAGAGTCACATTGAATTGGCTGAGCCCAAAGAACCTGCTTTCATTTCGAGAATTGTGTTACCTGAAGAAGATTTATATCCCAAAGATACAAGCTCAACCAACGAAGTCACCGTTACCATTTTAGAACCTCGATGA 2439 0.4112 MGIILTFSIIFACILVFSLKISVANDSINVLQSLSDGKTLVSKGGKFELGFFSPGSSQKRYLGIWYKNIPDKTFVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHTNSQKQAQNPVVEMLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLERKYTAWKSPDDPSPGDVSRVMKLYSYPEIYMMKGTQKLMRYGPWNGEYFSGMPDLLNNTIFGLSYVSNEDEIYYTYTLVNDSVISRTVTNQSATIVRYVWQEVEKIWKIYRSYPKEFCDKYDSCGPNGLCVRTQAQSCICQKGFSPKSPQNWNSSDWSGGCVRNKALSCRDDRFVKYKGLKVPATTNTWLNKSLGLKECEVKCLNDCSCMAYTNSDIRNGGSGCVLWFGDLIDMKEIETGGQDLYIRMNASEAEPVPSNNNTRKIVASTVAPISGFLILLITCIICRLHRNNAGNSSTEDNNNKRHVDDLDVQMYDLVTIVKATNNFSTENIIGEGGFGRVYKGIIDSQEIAVKTLSRNSWQGVTEFINEVNLTAKLQHRNLVKLLGCCIEGEERMLIYQYMENGSLDSLIFGDKSSKLLEWPQRFQIICGVARGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQLEGSTSRVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIICGKRNRGLYQQTRILNLVAHSWTLWKAGKGIDLIASNMKMSSCVISEVLRCLHVSLLCVQQYPDDRPTMMSVILMLESHIELAEPKEPAFISRIVLPEEDLYPKDTSSTNEVTVTILEPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02011 812 CDD B_lectin 32 151 IPR001480 -
Phac11g02011 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 776 - -
Phac11g02011 812 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02011 812 CDD PAN_AP_plant 337 417 - -
Phac11g02011 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 759 - -
Phac11g02011 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Phac11g02011 812 ProSitePatterns Protein kinases ATP-binding region signature. 503 524 IPR017441 GO:0005524
Phac11g02011 812 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Phac11g02011 812 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g02011 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Phac11g02011 812 Gene3D - 20 148 IPR036426 -
Phac11g02011 812 SMART ntp_6 339 418 IPR003609 -
Phac11g02011 812 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Phac11g02011 812 Pfam D-mannose binding lectin 73 177 IPR001480 -
Phac11g02011 812 SUPERFAMILY Protein kinase-like (PK-like) 482 769 IPR011009 -
Phac11g02011 812 Pfam PAN-like domain 339 404 IPR003609 -
Phac11g02011 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 571 - -
Phac11g02011 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Phac11g02011 812 Gene3D Transferase(Phosphotransferase) domain 1 572 781 - -
Phac11g02011 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 148 - -
Phac11g02011 812 SMART blect_4 31 151 IPR001480 -
Phac11g02011 812 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Phac11g02011 812 Pfam Protein tyrosine and serine/threonine kinase 499 715 IPR001245 GO:0004672|GO:0006468
Phac11g02011 812 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Phac11g02011 812 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02011 Phac-Chr11 29676492 29680996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g02011 427 785 Receptor kinase-like Gene Family AT4G23190 47.967 6.64e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac11g02011 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g02011 - - vra:106754325 1390.17