Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01998 ATGGCGACGAGGGCAGCAGTGGCGGCGCCACACGTTTTGCGACGCTTCTTCTGCTCAAACTCCGCTTCTTCATCTTTCCCCTTCGTTCCTACACCGCCTCCGGGCGCCGTCCCCAGCCCCGCCCGACCCACGGCGGAGCCCAACAACAACCTCTTTGTCTCCGGGCTTAGCAAACGGACTACTACAGAAAAGCTTCGTGAAGAATTTTCAAAGTTTGGTGAAGTTGTTCATGCAAGGGTGGTAACTGATCGAGTCTCAGGCTACTCTAAGGGGTTTGGTTTTGTGCAATATGCAACATTAGAAGAGGCTGCAAAGGGCATTGAAGGAATGGATGGCAAGTTTTTGGACGGCTGGGTTATATTTGCAGAGTATGCGAGACCAAGACCACCCCCAGGACATTTAAATAACAACAGTCCTCAGTTTGGCCGGCAGTAA 435 0.5218 MATRAAVAAPHVLRRFFCSNSASSSFPFVPTPPPGAVPSPARPTAEPNNNLFVSGLSKRTTTEKLREEFSKFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGHLNNNSPQFGRQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01998 144 FunFam RNA recognition motif-containing protein 28 139 - -
Phac11g01998 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Phac11g01998 144 Gene3D - 30 135 IPR012677 -
Phac11g01998 144 SUPERFAMILY RNA-binding domain, RBD 40 140 IPR035979 GO:0003676
Phac11g01998 144 PANTHER NUCLEOLAR PROTEIN 8 21 136 - -
Phac11g01998 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 117 IPR000504 GO:0003723
Phac11g01998 144 SMART rrm1_1 50 123 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01998 Phac-Chr11 29409508 29412799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01998 48 126 Eukaryotic Initiation Factors Gene Family AT4G34110 37.975 6.08e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01998 - - gmx:100789351 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01998 11 29409508 29412799 Phac11g01998 11 29409508 29412799 ECH