Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01960 ATGTCTTCTAACGCCATCATCCAATACTCCTCTTCTTCATCTCATGCAACTCACACCTATGATGTATTTCTCAGCTTCCGTGGTGAAGACACGCGCAACAACTTCACTGGTTTTCTCTTTCATGCTCTCCGTGCAAAAGGCGTCGATGCCTTCAAAGATGAGGAAGATCTCAAAAAAGGTGAATCCATAGCACCCGAGTTGCTGCAAGCCATTCAAGGCTCTCGAGTTTTCATAAACTATGCTTCCTCCACTTGGTGCTTGCGTGAACTGGCAGAGATATTTAACTGCGTTCACACTTTGCCTAGACGTGTTATACCTATATTTTATGATGTTGATCCTTCGGTGGTGCGCAAACAGAGCGGATGTTATGAGAAAGCATTTGAAGAACACGAAAAGAGATTGAGAGAAGATGGAGTGAAGATGGAGGAAACTCAGAGATGGAGAGAAGCTCTCACAAAAGTGGCGAATCTCTCTGGTTGGGATATCCGAAATAAGCCACAATATCTACAGATTGAAGAAATTGTTCAAAACATAATAAATATTTTGGGTCCCAAAATTTCAAGACTTCCAAAGGATGAACTAGTTGGTATAGAATCTCGGGTTGAAGAATTAACAAATCTACTTCATTTTGGGTCAATTAATGATGTTCGAGTTATTGGAATCAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTCAGGCTTTGTATGAAAGAGTCTTTCATCAATATAATTTTCACTATTTTATTGATGATGTGAGCAAAATTTATCGAGATTCTAGTTCATTAGGTGTACAAAAACAGTTAATTTGCCAGTCTCTAAATGAGAAAAATCTTGAAATTTACAATGCTTTTGAGGGAACATGTTTGGTGCAGAGTAGGTTGCACAATGCAAGAACACTTGTAGTTCTTGACAATGTTGATCAAGTTGAACAACTTAAGCTGTTTACAGGGAATAGAGATAATATGTTACGAGGATGCCTAGGTGGAGGGAGCAGAATCATCATAATTTCTAGGGATGAAGATATATTGAGGACACATGGAGTGGATGATGTTTATCAAGTCCAACCATTGAGTCTGAAAAAAGCTATGCAGTTGTTTTGTAGAAATGCTTTCAAAGTTAATTATATTTTGAGTGATTATAAAAAGTTGGCATATGAGGCCCTTTCATATGTTGAAGGTCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGTGATGTCTCACAATGGAAAAGTGTATTGGATAGGCTAAGATACAAGAAAACTAGAAATATTATGGATGTTTTACGTATAAGTTTTGAGCAGTTGGAAGAAGAAGAGAAAGAAATATTTCTTGATATTGCATGCTTCCTCAATTATCATGATGAGGAATATGTGAAGGAAATTTTAAACTTTCGTGGATTTCATTCTGAATATGGCTTACAAGTTCTGTTTGATAAATCACTCATAACCAACAAATATTGTGTGATACACATGCATGGATTGCTAAAGGATTTGGGAAGGAGTATTGTTCGAGAAAAATCACCTAAGGAGCCCATGAAGTGGAGCAGGTTGTGGGATTATGAAAATTTTCAGAAAGCTATGTTAGAGAATGAGTGGCTTCAGCTTAATAATGTGAACTTTTCAGGAAGTCTCACTCATCTTTCGAGTGAACTAGGATATCTTACTTGGAACAAATATCCTTTTCATTGTTTGCCTCCTAGTTTTCAGCCAGACAAACTATCGCTGCACAATTTGAAATGTTTGGATCTCTCTTACTCCAAAGATTTAGTTGAGATTCCAGATGTCAGAGAGGCCCTAAATCTTGAAAGGATAGAACTTGAAGAATGCATACAACTCCGAAATATCAATCCATCAATTGGTCTTTTGAGAAAGCTTGTTGTTTTGAATTTGAAAAATTGCATAAACCTAGTAAGCTTACCCAATACCATATTGAGCCTGAATTCTCTTGAACATTTGAATGTAAGTGGTTGTTCAAAATTGTATAACAATGAGTTATTAGATGAACCAAGGAACACACAACATTTGAAGAAGCTTTGTTTAAGCACAAAGAGACTCAATCACATGTTTGTTGCCCCCTCCCCTACTCTCACTTGTTTGCGTGAACTCGATCTAAGCTTCTGTAACTTAGTTCAAATCCCTGATGTCATTGGAAAATTATATTCTTTAAACTTACAACATTGCAAGCGACTCAAATACTTGCCTCATCTCCCTTCACGAATCTACATGCACTCAAAATATCAAATGTTTCCATTACCAAAGGCGGTAGGATTTATCATTTACAACTGCCCAGAATTAGTTGAGACGGAACGCTGCACTAGCATGATTTTTTCATGGATGATACAAGTTGTTGAGAATTCAAATGTTGAAAGTATTATTCCTGGAAGTGAAATACCGAGGTGGTTCAACAAACAGTTTGTGAGCATAGGCAAATCAATAGAGATTAATGCCTCTCCTGTTATGCATCACAATAATTGGATTGGTGTGGTGTGTTGTGTAATATTCCACCCAGACAATGAAAGGGAGAGGAGTTATTCAGACCTAACAGATGTTTGCGTTAGAGGTCCTCCAATTTATTTGGAAAAAGATCTATTCATTGAGCAGTCAGATCATATGTGGCTACTCTACATACGTCGGGAACAGTTAATTAAACAATGTGAATTGAAATTAAGAATAATGAACACTATAAATTTTCAAAAAGGGGTTGATTTCAAAAAATATGGGTATCGCTTTGTGTATGAACAAGACCTACAGCCAACAAACTTAACAATGATGCATGGAGAAAATTTGACAGCTCGGAAGCGGAAGTCTTCAGAAATGGAAGAAAACAGGTAG 2847 0.3716 MSSNAIIQYSSSSSHATHTYDVFLSFRGEDTRNNFTGFLFHALRAKGVDAFKDEEDLKKGESIAPELLQAIQGSRVFINYASSTWCLRELAEIFNCVHTLPRRVIPIFYDVDPSVVRKQSGCYEKAFEEHEKRLREDGVKMEETQRWREALTKVANLSGWDIRNKPQYLQIEEIVQNIINILGPKISRLPKDELVGIESRVEELTNLLHFGSINDVRVIGISGMGGIGKTTLAQALYERVFHQYNFHYFIDDVSKIYRDSSSLGVQKQLICQSLNEKNLEIYNAFEGTCLVQSRLHNARTLVVLDNVDQVEQLKLFTGNRDNMLRGCLGGGSRIIIISRDEDILRTHGVDDVYQVQPLSLKKAMQLFCRNAFKVNYILSDYKKLAYEALSYVEGHPLAIEVIGSSLFGRDVSQWKSVLDRLRYKKTRNIMDVLRISFEQLEEEEKEIFLDIACFLNYHDEEYVKEILNFRGFHSEYGLQVLFDKSLITNKYCVIHMHGLLKDLGRSIVREKSPKEPMKWSRLWDYENFQKAMLENEWLQLNNVNFSGSLTHLSSELGYLTWNKYPFHCLPPSFQPDKLSLHNLKCLDLSYSKDLVEIPDVREALNLERIELEECIQLRNINPSIGLLRKLVVLNLKNCINLVSLPNTILSLNSLEHLNVSGCSKLYNNELLDEPRNTQHLKKLCLSTKRLNHMFVAPSPTLTCLRELDLSFCNLVQIPDVIGKLYSLNLQHCKRLKYLPHLPSRIYMHSKYQMFPLPKAVGFIIYNCPELVETERCTSMIFSWMIQVVENSNVESIIPGSEIPRWFNKQFVSIGKSIEINASPVMHHNNWIGVVCCVIFHPDNERERSYSDLTDVCVRGPPIYLEKDLFIEQSDHMWLLYIRREQLIKQCELKLRIMNTINFQKGVDFKKYGYRFVYEQDLQPTNLTMMHGENLTARKRKSSEMEENR* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01960 948 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 665 IPR044974 GO:0006952
Phac11g01960 948 Coils Coil 423 443 - -
Phac11g01960 948 Gene3D Ribonuclease Inhibitor 522 665 IPR032675 -
Phac11g01960 948 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 183 - -
Phac11g01960 948 SUPERFAMILY L domain-like 533 745 - -
Phac11g01960 948 Pfam C-JID domain 797 921 IPR045344 -
Phac11g01960 948 Gene3D Ribonuclease Inhibitor 666 750 IPR032675 -
Phac11g01960 948 Gene3D - 358 441 IPR042197 -
Phac11g01960 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 451 IPR027417 -
Phac11g01960 948 Gene3D - 16 184 IPR035897 -
Phac11g01960 948 Pfam TIR domain 20 186 IPR000157 GO:0007165
Phac11g01960 948 SMART till_3 19 157 IPR000157 GO:0007165
Phac11g01960 948 Gene3D - 185 350 IPR027417 -
Phac11g01960 948 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Phac11g01960 948 PRINTS Disease resistance protein signature 392 406 - -
Phac11g01960 948 PRINTS Disease resistance protein signature 218 233 - -
Phac11g01960 948 PRINTS Disease resistance protein signature 294 308 - -
Phac11g01960 948 PRINTS Disease resistance protein signature 578 594 - -
Phac11g01960 948 SUPERFAMILY "Winged helix" DNA-binding domain 428 529 IPR036390 -
Phac11g01960 948 Pfam NB-ARC domain 199 427 IPR002182 GO:0043531
Phac11g01960 948 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01960 Phac-Chr11 28323524 28327858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01960 16 728 WRKY Transcription Factor Family AT4G12020 28.345 2.11e-73 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01960 - - pvu:PHAVU_010G055200g 1153.66