Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01957 ATGAGAGAGGAGTCAATAGGGCTGATTATTGGGGTTTCCATAGGGGTGGTTATTGGATTAGTTTTGGCAATTTTTGCATTCTTCTGCCATAGGTATCATCGGAAGCGTTCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATTCCAATCCGCACACATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCCAGAGTCACCCATAAAGTCAGGAAGGTATGGCATGCCCTTCTGGCTTGAGGGGTTTAAGAAGAGTAGTAACATGGTCCCAGCATCTGGCCTGCCTGAATATGCATACAAGGATTTGCAGAAAGCAACACATAATTTTACAACAGTCATAGGACAAGGTGCGTTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCACACAGAGGTCATGTTGCTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTATACATGAGTAATGGTAGCTTGGCATCCCACTTGTATGGTAGTGATGTGAATGAAGCACTGTGCTGGGATTTGAGGGTTCACATAGCTTTAGATGTGGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCCCCTGTAATCCATCGAGACATCAAATCTTCCAATATTCTGTTGGATCAATCCATGCGAGCCAGGGTTTCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGAACATTCACCAAGAAAAGTGATGTATACAGTTTTGGAGTGTTGCTCTTTGAAATTATAGCTGGCAGAAACCCTCAACAAGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAACATCGAGGGAAAAGTTGGGTGGGAGGAGATTGTGGATTCTCACCTTCAAGGAAACTTTGATGTGAAGGAACTCAATGAAGTTGCAGCACTAGCCTACAAATGCATCAACCGTGCCCCAAATAAACGTCCTTCTATGAGGGATATTGTGCAAGTGCTAACAAGAATCCTCAAATCAAGGCACCATGGGAATCATCACAAAAATTCCTTGTCAGCAACAGATGAAGTTTTCATTGATCCTGATCAGCTAGAGACCATGGTTTCAGTCACTGACCACAGGAGAGAAGAATCTAAGGATAATGCAACAGAGGTGTATGATGAGTACAATGTTGTTTTATCTTAA 1311 0.4272 MREESIGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTHGADSCTILSDSTLGPESPIKSGRYGMPFWLEGFKKSSNMVPASGLPEYAYKDLQKATHNFTTVIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGSLASHLYGSDVNEALCWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVSDFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNIEGKVGWEEIVDSHLQGNFDVKELNEVAALAYKCINRAPNKRPSMRDIVQVLTRILKSRHHGNHHKNSLSATDEVFIDPDQLETMVSVTDHRREESKDNATEVYDEYNVVLS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01957 436 FunFam calcium/calmodulin-regulated receptor-like kinase 1 189 397 - -
Phac11g01957 436 SMART serkin_6 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01957 436 Gene3D Phosphorylase Kinase; domain 1 86 188 - -
Phac11g01957 436 Gene3D Transferase(Phosphotransferase) domain 1 189 401 - -
Phac11g01957 436 ProSiteProfiles Protein kinase domain profile. 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01957 436 Pfam Protein tyrosine and serine/threonine kinase 115 376 IPR001245 GO:0004672|GO:0006468
Phac11g01957 436 SUPERFAMILY Protein kinase-like (PK-like) 91 376 IPR011009 -
Phac11g01957 436 CDD STKc_IRAK 119 379 - -
Phac11g01957 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Phac11g01957 436 PANTHER OS01G0750732 PROTEIN 5 392 - -
Phac11g01957 436 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01957 Phac-Chr11 28228842 28233095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01957 103 434 Glycoside Hydrolase AT3G07070 41.379 1.17e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Phac11g01957 PK_Tyr_Ser-Thr 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01957 - - gmx:100785634 780.4