Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01949 ATGGAGAAGGAAGAAAAGAAGAAGACAAAGGGAAGCATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAACCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCTAGGTCCATAGCAAATCTCAAGGATGTAATCCATGGAAGCAAAAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTAAGCAACTCAAGGTGTGAGCTGAAGATAACTGGGTATGGAGGCTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGCTGGAGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCAGGAACTCCTGGCCCTGGAGGACACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACCTCATCCACTCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCCTGGGCTTCAACCTAGCACTAGGTTGTCTCATGAGACAGATTCTAACGGGTCTTCTACTGTGACTTGCCACAAATGTGGAGAGCAATTCAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGTGACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACTAGCTGGCTAAAGTCTGAAAACCAGTGTGGTAGAATTGAACGAGTTTTGAAGGTGCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAGCTCCAGAAGAAGCATCCAAGATGTCTGGCTGATGGAAATGAGCTTTTGAGGTTTTATGGCACTACTGTGGCATGCTCTCTTGGCCTTAATGGCTCTTCTAGTCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGGAATGGCTTTTCAGCAAAGAAAGAGCTGAAGGGTGGCATTGGAGTCTTCACAACATCCACAAGTGGAAGGGCTTTTGAGTCCATAGAGATTTTTGGCGATGAACCATCACTGAGAAAAGCACTCATAGTGTGCAGAGTAATTGCTGGCAGGGTTCATAGGCCACTAGAAAACATTCAGGAAATGGCAGCACAAACAGGATTTGATTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTACTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCTTGA 1320 0.45 MEKEEKKKTKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPPGLQPSTRLSHETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFGDEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01949 439 MobiDBLite consensus disorder prediction 158 172 - -
Phac11g01949 439 MobiDBLite consensus disorder prediction 187 204 - -
Phac11g01949 439 MobiDBLite consensus disorder prediction 126 204 - -
Phac11g01949 439 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Phac11g01949 439 FunFam C2H2-like zinc finger protein 229 438 - -
Phac11g01949 439 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 20 437 - -
Phac11g01949 439 Gene3D - 219 438 - -
Phac11g01949 439 SUPERFAMILY ADP-ribosylation 230 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01949 Phac-Chr11 28148681 28151433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01949 17 439 C2H2 Transcription Factor Family AT5G54630 68.035 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac11g01949 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01949 - - gmx:100787790 785.408