Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01948 ATGGAGAAGGAAGAAAAGAAGAAGACAAAGGGAAGCATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAACCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCTAGGTCCATAGCAAATCTCAAGGATGTAATCCATGGAAGCAAAAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTAAGCAACTCAAGGTGTGAGCTGAAGATAACTGGGTATGGAGGCTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGCTGGAGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCAGGAACTCCTGGCCCTGGAGGACACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACCTCATCCACTCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCCTGGGCTTCAACCTAGCACTAGGTTGTCTCATGAGACAGATTCTAACGGGTCTTCTACTGTGACTTGCCACAAATGTGGAGAGCAATTCAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGGTAACAACATTGTTTTCTCTTTTATTTTTCCTACCCAAATATTTATGTTAATCTTGTTTAGTTTCATGGTTGGTTTCTATCTTCATGTTGAAATCCTCCTACATGTATATCATGTGCTTGTAACCTTCACTATATCATTGGCTTTTTTTTTTCTTCAATTTTTGTGTGATCCTCAAGTTGATTATTCAAACATTCTTCTGACCACACACTTTCTGGCCACATCTATATCTGATCGACATAGATTTTTATGTTGGGATGAGGAATATTAA 957 0.4222 MEKEEKKKTKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPPGLQPSTRLSHETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAGNNIVFSFIFPTQIFMLILFSFMVGFYLHVEILLHVYHVLVTFTISLAFFFLQFLCDPQVDYSNILLTTHFLATSISDRHRFLCWDEEY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01948 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 205 233 IPR013087 -
Phac11g01948 318 MobiDBLite consensus disorder prediction 158 172 - -
Phac11g01948 318 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Phac11g01948 318 MobiDBLite consensus disorder prediction 126 202 - -
Phac11g01948 318 MobiDBLite consensus disorder prediction 187 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01948 Phac-Chr11 28148681 28151433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01948 17 234 C2H2 Transcription Factor Family AT5G54630 56.175 1.26e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac11g01948 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01948 - - gmx:100787790 390.578