Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01926 ATGAAAGAAAATCCAAGCAAAGATATCATGGATGTGTTGCTAATAAGTTTTGATGGATTGGAGAATCTAGAAAAAGAAATATTTTTAGATATTGCTTGTTTTTTATCCAGTCAATATTTTTTCCATTTGGAGTCAACAAAAATGAATAAACTTCTAGACTATCGACAATTTTATCCTGACATTGGTTTGAAAGTTTTGATTGAGAAATCACTTATAAGTCGTCAAGGAGAGAAGATTGAAATGCATGACTTGTTGAAAGAGTTGGGTAAGAGTGTTGTCCGAGAAAAAGCACCCAAGGAACCAAGAAAGTGGAGTAGGTTATGGAGCTACAGAGATTTCCAAGAAGTCATGAAAATAAATAAGGAAGCAAAAAATGTTGAAGCTATAGTTATTGACAAAGATAAAGAAGAGTTTCTCCAAGGAAGAATAAGAGTGGATGCTCTCTCAAAAATGAATCACCTAGAGTTGCTCATTCTTCAAAATGTGAACTGTTTTGGAACTCTCAATTATATTTCTAATGAACTGAGATATCTATTTTGGAATCACTTTCCTTTCATGTCTTTGCCACCAACATTCCATCTAGATCAACTTGTAGAATTAATGTTGCCGGATAGCAATATCAAACAATTATGGGAAGGAAAAAAGTGTCTGCCTAATTTGAGAAGGCTGGATCTCAGTCACTCAAAAAATCTTATTGAGGTGCCAGACTTAACTGAGGTTCCACGTCTTACGTATCTCGATCTTGAAGGATGTATAGAAATCGTGCAGATTCATCCATCCATTGGTATTCTAAGAGAACTTTGTCATTTGAATTTGAGAAATTGTAAAAAACTTGTCCTTAATCCAAATGTCATATCTGGGCTCAGTTCTCTTGAATTCTTAAGTCTCTCTGGCTGTTCAAAAGTACTAAATAGTAAGATGTTAATGGACCCAAGGCACACAAAATATTTGGAGAAAGTTGATAAAAATACAAATATTATCCAATTGCCAACATCCTCTGTATACAAACTTCTAATGTTTCCTTTCCAGTTTTTCTCCCAACCAAAACCTGAAGATTCATTTGGTTTGTTATTGTCTTCTTTGTCTTGTGTCCCATGTTTGTCGCGTCTTGATATAAGCTTCTGCAATCTACTTCAAATCCCAGATGAAATTGGGAACTTGCGTTCTTTAGTAATATTAGATTTGCGGGGAAACAAATTTGTGACACTACCAAGCACCATCAAGCAACTTTCCAATCTAAAAAGTTTGAGATTGGAACACTGCAAGGAACTGAAATATTTGCCTGAGCTTCCGACAATAATAGCATACATGACTGACAGCATCTACAGTGGATTATTCATTTTTGATTGCCCCAAGTTAAGTGATATGGAACACTGTTATGGCATACTTTTTTCTTGGATGATGCAAAATCTTGAGGTTTACTTACAGCCTCCTATTTTGTCATATGAGATACGTGAGATGTTAATTGTTATTCCTGGAACTCAAATTCCAAAGTGGTTCAATAAACAAAATGCAAGTGATTCAATTAGTGTGGATCCATCTGCTGTTTTGGATGACCCAAATTGGATAGGTATTGCCATTTGTGTTCTATTTGTCACACATGAAAAAAATCCTATGAAGTTGGGTGAAAGACATCCTTATTATAATTGCCATGATATTTCATACGGTGTCAATAATGCCTACCGTTGGCCAAAAATTTATCCAGAAGTTTCAATACTTTCCAAGAAAGGTCTGGTGACAGTTGAATCAGGTCACTTGTTCACAGTGTTTTACTCTCGAGAACAATTCATTCATATTCTGAGAAGACATCCAGAAACCATGCATGAACTTCATGGAGTTGAATTTGAAATTGAGGTTAGTGGTAAAGGTTTTCGTAGTGTGGTGAAGAATTGCGGGTATCGTTGGATATTTAAAGAGGATCATCAACAATTAAACTTAAACATGTTTTTCGGAGGAAATTCTTCATCTCCAAAGAGGAGACTCCTAACAAGTGATTAA 1998 0.3519 MKENPSKDIMDVLLISFDGLENLEKEIFLDIACFLSSQYFFHLESTKMNKLLDYRQFYPDIGLKVLIEKSLISRQGEKIEMHDLLKELGKSVVREKAPKEPRKWSRLWSYRDFQEVMKINKEAKNVEAIVIDKDKEEFLQGRIRVDALSKMNHLELLILQNVNCFGTLNYISNELRYLFWNHFPFMSLPPTFHLDQLVELMLPDSNIKQLWEGKKCLPNLRRLDLSHSKNLIEVPDLTEVPRLTYLDLEGCIEIVQIHPSIGILRELCHLNLRNCKKLVLNPNVISGLSSLEFLSLSGCSKVLNSKMLMDPRHTKYLEKVDKNTNIIQLPTSSVYKLLMFPFQFFSQPKPEDSFGLLLSSLSCVPCLSRLDISFCNLLQIPDEIGNLRSLVILDLRGNKFVTLPSTIKQLSNLKSLRLEHCKELKYLPELPTIIAYMTDSIYSGLFIFDCPKLSDMEHCYGILFSWMMQNLEVYLQPPILSYEIREMLIVIPGTQIPKWFNKQNASDSISVDPSAVLDDPNWIGIAICVLFVTHEKNPMKLGERHPYYNCHDISYGVNNAYRWPKIYPEVSILSKKGLVTVESGHLFTVFYSREQFIHILRRHPETMHELHGVEFEIEVSGKGFRSVVKNCGYRWIFKEDHQQLNLNMFFGGNSSSPKRRLLTSD* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01926 665 Gene3D Ribonuclease Inhibitor 335 443 IPR032675 -
Phac11g01926 665 Gene3D Ribonuclease Inhibitor 135 325 IPR032675 -
Phac11g01926 665 SUPERFAMILY "Winged helix" DNA-binding domain 8 117 IPR036390 -
Phac11g01926 665 SUPERFAMILY L domain-like 143 451 - -
Phac11g01926 665 Pfam C-JID domain 491 641 IPR045344 -
Phac11g01926 665 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 328 442 IPR044974 GO:0006952
Phac11g01926 665 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Phac11g01926 665 Pfam Leucine rich repeat 367 422 IPR001611 GO:0005515
Phac11g01926 665 Pfam Leucine Rich Repeat 196 215 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01926 Phac-Chr11 27660159 27667076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01926 19 416 WRKY Transcription Factor Family AT4G12020 32.057 7.31e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01926 - - pvu:PHAVU_011G1362001 891.723