Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01880 ATGATAATTGGAAAAGGAGCCATGTGTGTAATTGTTAAAAGTTTTTTCTTACTTTGCCTGCTTGTGCAACCTTTAACAAGCCATGCTTCTGATCCAATAACAACTGTGGTTGTCAAAAATAAATTACAAAGAGGTCGAGACCTATTTCTTCATTGCAAATCTGCTGACGATGATCTTGGTGTGCAACGTATTCATCCTGATATGACTTTTCAGTGGAAATTCGAAATTAACTTTTTTGGAACAACATTGTTCCATTGTTCCTTTCAATGGGAATCTGTCTTGCATAAATTTGATATTTACAAAGCAAGCAGGGATGTTGATAAATGTTACTACTGCAGTTGGATAGTCAAAGAAGATGGACCATGTTTGAGTTATCTTGGAGGGTTCAATGATTGCTATCGTTGGAATAGTTTAGAAGAAAGATAG 426 0.3545 MIIGKGAMCVIVKSFFLLCLLVQPLTSHASDPITTVVVKNKLQRGRDLFLHCKSADDDLGVQRIHPDMTFQWKFEINFFGTTLFHCSFQWESVLHKFDIYKASRDVDKCYYCSWIVKEDGPCLSYLGGFNDCYRWNSLEER* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01880 141 PANTHER - 34 125 IPR010264 -
Phac11g01880 141 Pfam Plant self-incompatibility protein S1 35 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01880 Phac-Chr11 26039391 26039874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01880 26 137 Carbohydrate Esterase AT3G16970 42.373 2.04e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01880 - - pvu:PHAVU_011G171900g 203.371