Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01853 ATGCATTCTCGTGTTAAACAATTGGAAGAACTTCTAGATTTGAGTGCAAACGATATTGTTCGCCTTGTTGGAATTTGTGGGATGGGTGGAATAGGAAAGACGACACTTGCAACTACATTGTTTAAAAAAATCTCTCCTAAATACGATGCTTGTTGTTACATTGATGATTTAAGTAAAATTTATTTGGATCTTGGAGCAACAACTGCACAAAAACAACTTCTTTGTCAAGTTCTAAATCAAGGAAATATGGAGATATACCATGTTTCCCATGGAACTATGTTGATGAAAACTAGGCTACGTCACTTAAAGATGCTTGTTGTTCTTGATAATGTTGATGAAGTTGAACAATTAGAGAAATTGGGTTTGCATCCTGAATATCTAGGTGCAGGTAGTAGAATCATCATAATTTCTAGAGATTGTCGTATCTTACACAATTACGGAGTAAATGAAGTTTACGATGTTCAAGTCTTGGATGAAACTCAATCTCTTAAATTACTTTGCAAAAGAGCTTTCAAATCTAGGGACATTGGGAAAGAATATAAAGAGTTGACATTTGATGTATTGAAGTATGTGAAAGGTCTTCCATTAGCAATTAAAGTATTGGGCTCATTTTTGCTTGATCGAGATGTTTCTGAATGGAGAAGTGCATTGACTAGATTGAAAGAAAATCCAAGAAAAAATATCATGGATGTGTTGCGAATAAGTTTTGATGGATTGGAGCATATAGACAAAGAAATGTTTTTAGATATTGCTTGTTTCTTATCCACTACTAGTAATCACTACCATATGGAGTGGAAAGTTAAAAACTTTCTAGACTATCGACAATTTCATCCTAACACTGGAATGAAAGTTCTGATTGAGAAATCACTTATAAGTTGTCGAGAAGGGATTATTGAAATGCATAACTTGTTGAAAGAGTTTGGTAAGAGTTTTGTGCGAGAAAAAGCACCCAAGGAGCCAAGAAAGTGGAGCAGGTTATGGAGCTTCAAGGATCTACAAAAAGTCATGGAAATAAATAAGGAAGCCAAAAATGTTGAAGCTATAGTTATTGAACAACATCAAAACGAGTTCCTTCAAAGAAGAATAAAAGTGGATGCTCTCTCAAAAATGAATCGCCTTGAATTGCTCATTCTTCACAATGTGAACTGTTCTGGAACTCTCAATTACATTTCTAGTGAACTGAGATACCTATTCTGGAATTACTTTCCTTTCATGTCTTTGCCATCAACTTTCCATCTAGATCAACTTGTGGAATTGATCTTGCCTCATAGCAATATCAAGCGATTATGGATAGGCAAAAAGTGTTTGTCTAATTTGAGAATACTTGATCTCAGTCACTCCAAAAATCTTACTGAGGTTCCAGACTTAAGTGATGTTCCACATCTTATGAGTCTCATTCTTGAAGGGTGTACAGAAATTATCCAGATTGATCAATCAATTGGGTTTCTAAAAGAACTTCGGTCTTTGAATTTGAAAAATTGTAAGAAACTTTTCCTTAATCTGAATGTCATATTTGGGCTCACTTCTCTTCGTAGCTTATTTCTCTCTGGCTGTTCAAGATTATTAAACAGTAAGATGTTAATGGACCAAAGGCACACAGAACATTTGGAGAATGTTGATAAAAATACAAATGTCATCCAATTGCCTTTATACAAACTTCTAATGTTGCCTTTCCGGTTTTTCTCCCCTCCAAAACCTGAAGATTCACTTGGTTTGTTATTGTCTTCTTTGTCTTGTGTCCCATATTTGTTGTATCTTGATTTAAGCTTCTGCAATCTACTTCAAATCCCAGATGAAATTGGGAACTTGCGTTCTTTAGAAAGCTTGAATTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATCAAGCAACTTTCCAATCTTCAACGTTTGAACTTGGAACACTGCAAGCTGCTGAAATATTTGCCCGAGCTTCCGAAAATAAAAGGAAAAACAAATTTCAAATACTACGGGGGATTATACATTTTTGATTGCCCCAAGTTGAGTGAAATGGAACAGTATTATAGCATGGTTTTTTCTTGGATGACGCAAACTCTTGAGGTTTACTTACAACCTACTATTTCCTTAGCTAAGATGGAAATTGTTATTCCTGGAACTCAGATTCCAAAGTGGTTCCATGAACAAAAGGCAGGTAGATCAATAATGATGGATCCGTCTGCTGTTATAGATGACCCAAATTGGATAGGTGTTGCCATTTGTGTTCTATTTGTCACACATGAAGATCCTATGAATTTGGGTGAAAGATATCATGATCCTCACAGTACTATTGGATACGGTGTCAATAATGTCCACCATTTGACAAGATCTTATTTTATGGTTCCAATACATTTCGAGAAAGATCTGGTAATTCTAAAAGACGTTCCGGATATTGATCCCAATTATCTAAATTCTATTGTTGAGCACCTAGAAAAAGTGGTATGTGGGTTTTCTTTATGA 2460 0.3533 MHSRVKQLEELLDLSANDIVRLVGICGMGGIGKTTLATTLFKKISPKYDACCYIDDLSKIYLDLGATTAQKQLLCQVLNQGNMEIYHVSHGTMLMKTRLRHLKMLVVLDNVDEVEQLEKLGLHPEYLGAGSRIIIISRDCRILHNYGVNEVYDVQVLDETQSLKLLCKRAFKSRDIGKEYKELTFDVLKYVKGLPLAIKVLGSFLLDRDVSEWRSALTRLKENPRKNIMDVLRISFDGLEHIDKEMFLDIACFLSTTSNHYHMEWKVKNFLDYRQFHPNTGMKVLIEKSLISCREGIIEMHNLLKEFGKSFVREKAPKEPRKWSRLWSFKDLQKVMEINKEAKNVEAIVIEQHQNEFLQRRIKVDALSKMNRLELLILHNVNCSGTLNYISSELRYLFWNYFPFMSLPSTFHLDQLVELILPHSNIKRLWIGKKCLSNLRILDLSHSKNLTEVPDLSDVPHLMSLILEGCTEIIQIDQSIGFLKELRSLNLKNCKKLFLNLNVIFGLTSLRSLFLSGCSRLLNSKMLMDQRHTEHLENVDKNTNVIQLPLYKLLMLPFRFFSPPKPEDSLGLLLSSLSCVPYLLYLDLSFCNLLQIPDEIGNLRSLESLNLGGNKFVTLPSTIKQLSNLQRLNLEHCKLLKYLPELPKIKGKTNFKYYGGLYIFDCPKLSEMEQYYSMVFSWMTQTLEVYLQPTISLAKMEIVIPGTQIPKWFHEQKAGRSIMMDPSAVIDDPNWIGVAICVLFVTHEDPMNLGERYHDPHSTIGYGVNNVHHLTRSYFMVPIHFEKDLVILKDVPDIDPNYLNSIVEHLEKVVCGFSL* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01853 819 Pfam NB-ARC domain 7 226 IPR002182 GO:0043531
Phac11g01853 819 Gene3D Ribonuclease Inhibitor 567 714 IPR032675 -
Phac11g01853 819 SUPERFAMILY "Winged helix" DNA-binding domain 227 336 IPR036390 -
Phac11g01853 819 Gene3D Ribonuclease Inhibitor 331 546 IPR032675 -
Phac11g01853 819 Pfam Leucine Rich Repeat 415 434 IPR011713 -
Phac11g01853 819 Pfam C-JID domain 704 772 IPR045344 -
Phac11g01853 819 Gene3D - 156 240 IPR042197 -
Phac11g01853 819 Pfam Leucine rich repeat 583 639 IPR001611 GO:0005515
Phac11g01853 819 SUPERFAMILY L domain-like 362 669 - -
Phac11g01853 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 250 IPR027417 -
Phac11g01853 819 PRINTS Disease resistance protein signature 434 450 - -
Phac11g01853 819 PRINTS Disease resistance protein signature 22 37 - -
Phac11g01853 819 PRINTS Disease resistance protein signature 98 112 - -
Phac11g01853 819 PRINTS Disease resistance protein signature 191 205 - -
Phac11g01853 819 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 525 IPR044974 GO:0006952
Phac11g01853 819 Gene3D - 1 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01853 Phac-Chr11 24914266 24919028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01853 7 645 WRKY Transcription Factor Family AT4G12020 31.108 1.84e-64 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01853 - - vra:106780706 1058.51