Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01852 ATGTTAATTCTTCTTCAAGATTTGAGTTCCCATGTGTGGCCTTTTGGGACCAGCAACAGTGGCAGAATTGTCACAATTCAAAGCCTGTGGGCAGCCGCAGCAGATGAAGGACTACAGGCAACTATAGTTAAGGGCAACAGCAAGCAAAGCAAAGTGTGTCTGCCTAAAGAAAACCTATGCGGCAACAAACCCTTACAAGAAAAAAATAAGAGAGCCGCATTTAGGAAGAGAAAAGGGAGAGATATTGAAAAAAAACTGGATTTCAGTGGGAATCAGTATCAACCACCAAGTCCTATACAAAGTCCACTTGACTCACAACAACATAACTTGATCAGCACACACAGAGCTCGTTATCAAGTTTCTCAAAACCAACCTCGACATGATAAAGGCATAACGAGAAGTTCCCACCGAATAGAACCATCTACTTTGAACCAAGCCATAAAACACACAAAGAATAATAGAGGAGAAACATTCACAAGGGGCATGAGGAGCAGTGTAGGAGATATTGTTCAAGTGGAAGGAGGACACATTGTTAGGTCCACAGGTAGAAAAGATCGACACAGCAAGGTCTATACTTCCAAAGGGCCTCGTGATCGCCGGGTTAGACTCTCAGCACACACAGCCATTGAGTTCTATGACGTTCAAGACAGACTTGGCTATGACAGACCAAGCAAGGCTGTGGACTGGCTCATCAAGAAGGCAAAGTCTTCCATTGACAAGCTTGCGGAGCTTCCTCCATGGCATCCACCTACTCATGAGGAAAAGCAGAATGATGCTGCAGGATCAAGTGGAATCATGGCAGTTGAACAACAACAAGAACATCATCAACAACAGTCAGAGTCTTGTGGTTACAACTTTCACCTCCAGAGGCAACTGGGGGCCTTTATTTCAACCCATGTTGACACTGACCCCATCAATTTTCAAACCAACAACTCCTCAGGAGATCTTGGCCTATCTCTCCACTGCTTCCAAGATCAGCCTGGCCTCATTCATTGGCCATCACAACAAGGTGCAAATCAAGCACCTCCTTCAAATGAACACCAAACCCTTTTTGCGGGCTCAATCCCAGTTGGTTTTGAGAACCATTATCAAAGAACTGTGACTTGGAACAATGAAGCAACGACCGGGGATCATGTGAGCAGAATGGGGTTCTTTCTCAACTCACAGCCATTTATAAGCCAAGGTTCTGCTTCAGCTTATGCACAAACAGGTTTGTGTCTGATGGATTAG 1230 0.448 MLILLQDLSSHVWPFGTSNSGRIVTIQSLWAAAADEGLQATIVKGNSKQSKVCLPKENLCGNKPLQEKNKRAAFRKRKGRDIEKKLDFSGNQYQPPSPIQSPLDSQQHNLISTHRARYQVSQNQPRHDKGITRSSHRIEPSTLNQAIKHTKNNRGETFTRGMRSSVGDIVQVEGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAELPPWHPPTHEEKQNDAAGSSGIMAVEQQQEHHQQQSESCGYNFHLQRQLGAFISTHVDTDPINFQTNNSSGDLGLSLHCFQDQPGLIHWPSQQGANQAPPSNEHQTLFAGSIPVGFENHYQRTVTWNNEATTGDHVSRMGFFLNSQPFISQGSASAYAQTGLCLMD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01852 409 MobiDBLite consensus disorder prediction 70 104 - -
Phac11g01852 409 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 122 382 IPR005333 GO:0003700
Phac11g01852 409 Pfam TCP family transcription factor 182 277 IPR017887 -
Phac11g01852 409 ProSiteProfiles TCP domain profile. 183 241 IPR017887 -
Phac11g01852 409 MobiDBLite consensus disorder prediction 242 262 - -
Phac11g01852 409 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01852 Phac-Chr11 24777682 24780579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01852 166 249 TCP Transcription Factor Family AT3G15030 86.905 5.11e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac11g01852 TCP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01852 - - vum:124834546 578.17