Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01829 ATGGGTTTTCGTCTACCTGGTATCAGAAAGGCAATATTTGCAGCAAATCAAGCATCTTCAAAAGCAGTGGATGCGCCAAAGGGCTATCTTGCAGTCTATGTTGGGGAGAAAATGAAGCGTTTTGTGATCCCTGTATCATACTTGAACCAACCTCCATTCCAGGACTTGCTGAGTGAAGGTGAGGAAGAATTTGGATATTATCATTCCATGGGTGGTCTCACAATTCCTTGCAACGAAGATGTCTTCCAACGCATAACTTCTTGCTTCACTTCAAAATAA 279 0.4229 MGFRLPGIRKAIFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPVSYLNQPPFQDLLSEGEEEFGYYHSMGGLTIPCNEDVFQRITSCFTSK* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01829 92 Pfam Auxin responsive protein 16 88 IPR003676 GO:0009733
Phac11g01829 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01829 Phac-Chr11 24426811 24427606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01829 17 89 Calmodulin-binding Proteins AT3G43120 46.575 4.89e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01829 K14488 - gmx:100820621 163.31