Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01822 ATGGGTTTTCGTTTACCTGTTATCAGAAAGGCCTTATTCGCAGCAAATCAAGCATCTTCTAAAGCAGTGGATGCACAAAAGGGCCATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCCGTATCATACTTGAACCAACCATCATTCCAGGAGTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACCGAAGATGTCTTCCAACGTATAACTTCATGCTTGAATTCACCTTAA 279 0.4265 MGFRLPVIRKALFAANQASSKAVDAQKGHLAVYVGEKMKRFVIPVSYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCTEDVFQRITSCLNSP* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01822 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Phac11g01822 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01822 Phac-Chr11 24397491 24398073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01822 17 91 Calmodulin-binding Proteins AT5G20810 46.667 5.73e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01822 K14488 - gmx:100820621 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01822 11 24397491 24398073 Phac11g01822 11 24397491 24398073 ECH