Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01812 ATGTGCCCTTGTCTTTCAATTGGTCCAATTACTCCTATTGCGATCAACATAGATCATTCACATCCTAGAGCATTCAAAACTCAAGAGCTTATTCTCAATACTTTCCGTAAACCATTCTTCCAAATCAACACAATGGGGTTTCGTTTACATGCTATCCGAAAGGCTTTATTTGCAACAAATCAAGCATCTTCAAAAGCAGGGGATGTGCCAAAGGGCTATCTTGCAGTCTATGTAGGAGAGAAAATGAAGCGGTTTGTAGTCCCCTTATCATACTTGAATCAACCTTCATTTCAGGACTTGTTGAATCAAGCTGTTGAAGAGTTCGGATATGAACATCCCATTATTGGTGGCCTCTCAACTCCTTGCAGTGAAGATGTCTTCCGACGCATAACGTGTTGCTTCGATTGA 408 0.4093 MCPCLSIGPITPIAINIDHSHPRAFKTQELILNTFRKPFFQINTMGFRLHAIRKALFATNQASSKAGDVPKGYLAVYVGEKMKRFVVPLSYLNQPSFQDLLNQAVEEFGYEHPIIGGLSTPCSEDVFRRITCCFD* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01812 135 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 61 132 IPR003676 GO:0009733
Phac11g01812 135 Pfam Auxin responsive protein 59 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01812 Phac-Chr11 24091703 24092465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01812 42 135 Calmodulin-binding Proteins AT3G43120 37.234 1.02e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01812 K14488 - gmx:113002344 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g01812 11 24091703 24092465 Phac11g01812 11 24091703 24092465 ECH