Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01764 ATGATTGATCAATTGTTACCTCTTACAGATAATGCTGGGACTAACAAAGCAGCCTCTAGCAGCACTTCATTGAACACTAAGAGGCTGGATGAGGATACAGAGAATCTAACTCATGAGAAAGTACCAACTGAACTTAAGAAGGCTATAATGCAAGCTAGGATGGACAAGAAACTTACTCAGTCTCAGCTTGCTCAAGCAATCAACGAGAAACCTCAAGTGATCCAGGAATACGAATCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGCAAGTTGGAAAGAGCCCTTGGAACTAAACTGCGTGGCAAGAAATAA 315 0.4222 MIDQLLPLTDNAGTNKAASSSTSLNTKRLDEDTENLTHEKVPTELKKAIMQARMDKKLTQSQLAQAINEKPQVIQEYESGKAIPNQQIIGKLERALGTKLRGKK* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01764 104 CDD HTH_XRE 47 100 IPR001387 -
Phac11g01764 104 FunFam Multiprotein bridging factor 1 33 104 - -
Phac11g01764 104 MobiDBLite consensus disorder prediction 1 38 - -
Phac11g01764 104 MobiDBLite consensus disorder prediction 8 26 - -
Phac11g01764 104 ProSiteProfiles Cro/C1-type HTH domain profile. 49 103 IPR001387 -
Phac11g01764 104 SMART mbf_short4 48 103 IPR001387 -
Phac11g01764 104 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 104 - -
Phac11g01764 104 Pfam Helix-turn-helix 49 100 IPR001387 -
Phac11g01764 104 Gene3D - 33 104 IPR010982 GO:0003677
Phac11g01764 104 Pfam Multiprotein bridging factor 1 11 41 IPR013729 -
Phac11g01764 104 SUPERFAMILY lambda repressor-like DNA-binding domains 43 100 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01764 Phac-Chr11 23057437 23060201 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Phac11g01764 HTH_3 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01764 K03627 - gmx:100500420 174.866