Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01752 ATGGCCTCCATGCCCATGGGGCACCACCACCACCAACCGCCGCCGCCGGCGTTGCCTATGCAGCCCTCACAAACGCAGCAGTCTCAGCCGCAACCGGAAGTGCCACGCCGGAGCTCCGATATGGAGACCGATAAGGATATGTCAGCCACTGTCATTGAGGGGAATGATGCGGTCACAGGCCACATAATCTCCACCACTATTGGAGGCAAAAATGGGGAACCTAAACAAACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCGTTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAGACTGGAGAGCCAGTGGCTATTAAAAAGGTCTTGCAAGACAGGCAATACAAAAATCGTGAATTGCAGTTAATGCGCTTAATGGATCACCCAAATGTAATTTCCCTGAAGCACTGTTTCTTCTCCACAACAAGCAGAGATGAACTTTTTCTAAACTTAGTAATGGAATATGTACCTGAGACAATGTACCGAGTTATAAAGCACTACAATACTATGAACCAGAGGATGCCTCTCATCTTTGCAAAACTGTACACATATCAAATCTTTAGGGGATTAGCATATATCCATACTACACTGGGAGTTTGCCATAGGGACGTGAAGCCTCAAAATCTTTTGGTTCACCCACTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCCAAAGTTCTGGTCAAGGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCTACAGAATACACAGCTTCTATTGATATCTGGTCAGCTGGTTGTGTTCTTGCTGAACTTCTTCTAGGACAGCCACTATTTCCTGGAGAAAATCAGGTGGATCAACTTGTGGAAATTATTAAGGTTCTCGGTACCCCAACACGAGAGGAAATTCGTTGCATGAACCCAGAATATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCATAAGCGAATGCCTCCGGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTCCGATGCACTGCGCTGGAAGCATGTGCTCATCCTTTCTTTGACGAGCTTCGGGAGCCAAATGCTCGCCTACCTAATGGCCGTCCATTGCCCCCGCTTTTTAACTTTAAACAGGAAGTACGTGTATACTTTATGTTTTTACATTAA 1197 0.4511 MASMPMGHHHHQPPPPALPMQPSQTQQSQPQPEVPRRSSDMETDKDMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEPVAIKKVLQDRQYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVIKHYNTMNQRMPLIFAKLYTYQIFRGLAYIHTTLGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTASIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPEYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQEVRVYFMFLH* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01752 398 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01752 398 SUPERFAMILY Protein kinase-like (PK-like) 79 388 IPR011009 -
Phac11g01752 398 MobiDBLite consensus disorder prediction 1 43 - -
Phac11g01752 398 Gene3D Transferase(Phosphotransferase) domain 1 160 394 - -
Phac11g01752 398 SMART serkin_6 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01752 398 Pfam Protein kinase domain 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01752 398 Gene3D Phosphorylase Kinase; domain 1 65 159 - -
Phac11g01752 398 ProSitePatterns Protein kinases ATP-binding region signature. 86 110 IPR017441 GO:0005524
Phac11g01752 398 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 44 389 - -
Phac11g01752 398 CDD STKc_GSK3 75 367 IPR039192 -
Phac11g01752 398 MobiDBLite consensus disorder prediction 22 36 - -
Phac11g01752 398 FunFam Shaggy-related protein kinase kappa 160 396 - -
Phac11g01752 398 FunFam Glycogen synthase kinase-3 beta 64 159 - -
Phac11g01752 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01752 Phac-Chr11 22809464 22814683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01752 84 364 MAP Kinase Gene Family AT3G59790 36.301 1.07e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phac11g01752 Pkinase 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01752 K14502 - gmx:100810924 738.413