Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01746 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGGGCAGGGAGTCTAGGGAGAGGAGGCGGATGCCGAGGGTTATGAGTGTCCCAGGGTTTCTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAACCCGTCGACAGTTACTACAGATAGAATGATCATTGTGGCTAACCAGTTACCGTTGAAGGCAAAGCGAAGAGAGGACAACAAAGGGTGGTCTTTCAGTTGGAATGAAGATTCGTTACTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGTTCCTTACGCGTTGACATTGATCCAGCAGAACAGGATGACGTGTCTCAGAATTTATTGGATAAATTCAAATGTGTTCCGACATTTCTACCTGCTGACGTTTTGGCAAAATTTTATGATGGTTTTTGTAAAAGGCAGTTGTGGCCACTTTTTCATTACATGTTACCATTTTCAACAGACAAAAGCCACCGATTTGATCGTACCATGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAGAAAGTAGTTGAAATAATAAACCCTGAGGATGATTACATTTGGATTCATGATTATCATTTGATGGTGTTGCCAACTTTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAGATTTACAGGACTCTTCCTGTCAGGGAAGAGATACTCAAAGCTTTACTAAACTCTGATATCATCGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCTTGCTGCAGTCGTATGCTGGGTCTGGAGTATCAGTCTAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGCCGGATTGATTCAGTCATGAGAATGGCAGTTGAGGAGACCGAGGTTAAGGAGCTCAAAAGGCAATTTGAAGGGAAAACTATCTTACTCGGTGTTGATGACATGGACATTTTTAAAGGCATAAATTTGAAGATTCTGGCGATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGAAGAGCTGTTCTGGTTCAGATAGTTAATCCTGCTAGAGGTAAAGGGATACATCTGGAGGATATCCATGCTGAAATACAAGAAAGCTGCACCCGGATCAACAGAGTGTTTGGGCGGCCTGGTTATGAACCTATTGTTTTTATTGATAGAGCAGTATCTATTGCTGAAAAAGTTGCCTATTACAGCATTGCAGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATACGTTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATGTTCCAATGTCAGTGACCCAAAGAAGAGTATGCTAGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCTATCTCAATGAGTGATGGGGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTACTGGTCACGTAGTTTTTTGCAAGACATGGAGCGGGCTTGCACAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGTCTAAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTATCGATTGATGCTATGGTTTCGGCTTACAAGAGAGCTAGGAGTAGGGCCATTTTGCTGGATTATGATGGTACTGTGATGCCGCAGAACTCCATTAATAAGAGTCCAAGCAAGCAGGTCTTGTCTATAATGGAATCACTTAGTGCAGACCCCAAAAATATTGTTTTCATTGTTAGTGGAAGGGGAAGAAATAGTTTAAGTGACTGGTTTGCTCCCTGCAAAAAACTTGGAATTGCCGCAGAACATGGGTACTTCCTGAGGTCTGTTCTCTCTCTATCTCTCTGA 2019 0.423 MMSRSYTNLLDLASGNFPAMGGRESRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQNLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTMWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIDSVMRMAVEETEVKELKRQFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEDIHAEIQESCTRINRVFGRPGYEPIVFIDRAVSIAEKVAYYSIAECVIVTAVRDGMNLTPYEYVACRQGISGSESCSNVSDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRARSRAILLDYDGTVMPQNSINKSPSKQVLSIMESLSADPKNIVFIVSGRGRNSLSDWFAPCKKLGIAAEHGYFLRSVLSLSL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01746 672 Gene3D Glycogen Phosphorylase B; 57 317 - -
Phac11g01746 672 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 665 IPR001830 GO:0003824|GO:0005992
Phac11g01746 672 FunFam Alpha,alpha-trehalose-phosphate synthase 318 531 - -
Phac11g01746 672 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 57 316 - -
Phac11g01746 672 Gene3D Glycogen Phosphorylase B; 318 531 - -
Phac11g01746 672 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 551 - -
Phac11g01746 672 Gene3D - 593 669 IPR023214 -
Phac11g01746 672 Pfam Glycosyltransferase family 20 64 547 IPR001830 GO:0003824|GO:0005992
Phac11g01746 672 CDD GT20_TPS 64 547 IPR001830 GO:0003824|GO:0005992
Phac11g01746 672 Pfam Trehalose-phosphatase 597 667 IPR003337 GO:0003824|GO:0005992
Phac11g01746 672 SUPERFAMILY HAD-like 594 665 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01746 Phac-Chr11 22741596 22747204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01746 1 665 Trehalose Biosynthesis Gene Families AT1G06410 77.895 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01746 K16055 - gmx:100800847 1278.46