Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01728 ATGAGCCGCCACAGGCACAACTTCACACCTCTGCCACAGCAAAGAGGTTTTAGATCCTATGATGGCAGCACTTACAATCACCATGAATCCAATGAAGTGCCTGTGTTTTACAGATCTAACTCTACTCATGCCACCGATGAAAGAAGTGCAGATGTAATACCTCGACAACGGGTTTGGGAATTCAGACATCCTGTAGGATTCCAACACAGTATACCTTATTTTCCAGCAGCAGCAGCTGCACCTAGAAGACAACAAATTCATATTCACAATGAGGATATGGGAAGGCTCAGAGATATTTTCCTTCAGCAACCTTCAAGATATACATTCCAATCAAGAACACAAGTTCCCCCAGTAGTAGAAATTTCCAAATCAACAGCTTTGAGCAAGCTTAAGAAAGTAGTGTATGACCATCACCCTCCCCTAAAGAGGTATGCTAGGAACCTGAGTTTATATTACAGAAAAAATGCTGAAGAAAAACCTTTGGAAGAGAAGGAGAAGGAAAAAGATGAAGATGGTAAGAGGTGTGCCATTTGCTTGGAAGATTTTAAGACTGGTGAAGAGGTGATGCTCACTCCATGCAACCACATGTTTCATGAGGATTGCATAGTGCCATGGCTAACAACTAAGGGTCAGTGCCCAGTTTGTAGGTTTGTGATTTGTGAGATGGGATGTGGGAACCCTTCATCCTTCAACAACAATGACTTGGCCTCTTTGGAATCTAACAACCTCTTTAATGGAGAGCTTTTTTCAGTTTTGAGGGCCATGGAAGAAGCTTTTCAATTGGGCAGTAGGACTTAA 798 0.4236 MSRHRHNFTPLPQQRGFRSYDGSTYNHHESNEVPVFYRSNSTHATDERSADVIPRQRVWEFRHPVGFQHSIPYFPAAAAAPRRQQIHIHNEDMGRLRDIFLQQPSRYTFQSRTQVPPVVEISKSTALSKLKKVVYDHHPPLKRYARNLSLYYRKNAEEKPLEEKEKEKDEDGKRCAICLEDFKTGEEVMLTPCNHMFHEDCIVPWLTTKGQCPVCRFVICEMGCGNPSSFNNNDLASLESNNLFNGELFSVLRAMEEAFQLGSRT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01728 265 MobiDBLite consensus disorder prediction 1 22 - -
Phac11g01728 265 SUPERFAMILY RING/U-box 157 222 - -
Phac11g01728 265 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 52 217 - -
Phac11g01728 265 SMART ringv_2 174 216 IPR011016 GO:0008270
Phac11g01728 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 220 IPR013083 -
Phac11g01728 265 SMART ring_2 175 215 IPR001841 -
Phac11g01728 265 FunFam RING/U-box superfamily protein 159 233 - -
Phac11g01728 265 Pfam Ring finger domain 174 216 IPR001841 -
Phac11g01728 265 ProSiteProfiles Zinc finger RING-type profile. 175 216 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01728 Phac-Chr11 22241170 22245430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01728 127 263 C3H Transcription Factor Family AT3G58720 50.355 1.03e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01728 - - vun:114168869 424.091