Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01717 ATGATCACCACCACGCTCAGCCGTTCGCCCGGTTTCACAATTGCGGTTGACGCATCCGAGGATCCTCTCGTACCGTTTCTCTGGTCTATCAAGGAAACCCTAGAAGCTTCGGACGAATCCACCTCGAACCTCAGTAACTTACTCAGAGATTGCATCAGAAACTTCAAGAACAATGACCGGTATCGGAACGATGTCAGATTCCTCAAGATCTGGCTCCTCTATATGGGAGTTACTGATGATTTTGCCAGTGTTTTCAATGAAATGCTGGACAGTAATGTATGTGCCAAGAATTCTTCACTTTATGTGTGGTCTGCAAGTTTATTTGAGTTGAAGGGAAGATTGCGTTATGCTCTCTTCATCTACCAGCTTGGGATTCGCAGGAATGCGAAGCCAATTGAGTGGTTGAGGAAGGCGCTGACCTTATTTCTCAATAGGATGTCTGAAATACAGAATGCTGCTTCAAACCAGAAGGTTGATGATCTAGAATTCATGAAATTGGAAAATAGTTTCATTAATCCTTGGGACACTTCCACCATGGATAACCTCTTAAAGACTATACATCCTTTAATTATAAAATTTGATGGGTATCGTTCAAAGGCTAAACCATACTCAGGAAAAGTGGTCTTATCTGCGTTGAAGAATTCATCAAGGAATAAAGTTATTGAGATAGGTGGAATGAAGTACCTTATAAAGGGATGTGCTGGACATGGTGGTTTTGCCCAAGTATATAAGGCCAATGTCAACAGTGATCCTGACAATGTTGTTGCTCTAAAGATACAAAAACCAGCTTTCCCGTGGGAATTTTACATTTACCGTCAGCTTGATCTGCGCATCTTAGACAGAGAGAGGTCAAGTTATGGTTTCGCTCACGGAATTCATCTGTATTCTGACTGTAGTATACTCATCTGTGACTATTTAGCTAATGGGACACTACAGGATGCGGTAAACTCATATGTGGTCTTAGGAAAATCCATGGAAGAAGTGTTATGCATTTATTATACAATTGAAATGTTACACATGGTTGAAACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTAATTCGATATGCTAGGGGTAAGGGTGACCTTACAGAAGATGGGTTCTTGAACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTGCATCTCTTTCCAGATCACACGCTATTTAAGGGTGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGCGGATAAGCCGTGGAAATTTCAGGCAAGTCACGTAGATGCATATGGCCTTTGTGCTATTGTTCATGTGATGCTGCATGGTTCCTATATGGAAGTCGTCAAAAAAGAACAATCTGATGGGGGCTACCTCTATCTTCCCAGACGACCCTTTAAACGTTACTGGAACATTGAGCTATGGAAGAGTTTCTTCACTAAGATGCTAAACGAATACCCCCATGATGATGATAGGAGTTTGCTGCAGGACTTGAAGAAGTCCTTCCAAGACTATATGGGCTCCAATCCCCACCTTATAAAGAAACTAATGGAGTTACTCTCAAAGCAAAGGGCTTCCATGTGTTCTGCTTAA 1611 0.4221 MITTTLSRSPGFTIAVDASEDPLVPFLWSIKETLEASDESTSNLSNLLRDCIRNFKNNDRYRNDVRFLKIWLLYMGVTDDFASVFNEMLDSNVCAKNSSLYVWSASLFELKGRLRYALFIYQLGIRRNAKPIEWLRKALTLFLNRMSEIQNAASNQKVDDLEFMKLENSFINPWDTSTMDNLLKTIHPLIIKFDGYRSKAKPYSGKVVLSALKNSSRNKVIEIGGMKYLIKGCAGHGGFAQVYKANVNSDPDNVVALKIQKPAFPWEFYIYRQLDLRILDRERSSYGFAHGIHLYSDCSILICDYLANGTLQDAVNSYVVLGKSMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDNLLIRYARGKGDLTEDGFLNRSGPWCDQGLCLVDWGRGIDLHLFPDHTLFKGDCRTSGFRCIEMLADKPWKFQASHVDAYGLCAIVHVMLHGSYMEVVKKEQSDGGYLYLPRRPFKRYWNIELWKSFFTKMLNEYPHDDDRSLLQDLKKSFQDYMGSNPHLIKKLMELLSKQRASMCSA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01717 536 Pfam Mad3/BUB1 homology region 1 17 125 IPR013212 -
Phac11g01717 536 Gene3D - 13 164 - -
Phac11g01717 536 Gene3D Transferase(Phosphotransferase) domain 1 226 533 - -
Phac11g01717 536 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 166 530 IPR015661 GO:0007094
Phac11g01717 536 SMART serkin_6 228 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01717 536 SMART mad3_bub1_i 5 125 IPR013212 -
Phac11g01717 536 Pfam Protein kinase domain 235 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01717 536 ProSiteProfiles Protein kinase domain profile. 228 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac11g01717 536 ProSiteProfiles BUB1 N-terminal domain profile. 10 166 IPR013212 -
Phac11g01717 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Phac11g01717 536 SUPERFAMILY Protein kinase-like (PK-like) 227 515 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01717 Phac-Chr11 22034978 22042719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01717 222 361 MAP Kinase Kinase Kinase Kinase AT3G15220 29.787 1.14e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Phac11g01717 Pkinase 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01717 K02178 - gmx:100783171 923.694