Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01626 ATGCGTTGGTCGTCCAGCTTCTTTCACACAGCCTCTAGGGTTTTCAATGAGTATCCATCATGGTCCAAGTCTGTTCTTGTTTGCACTGTCATCAGTGGAGGAGGAGCAGTGGCATTTTGCGATGTGAAACCAGAATCTGGCAATGAAAGTCCAAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTCTGAAAAATATGAAAAGTACCTCCTACGATATTCATGTGGTTTCACCACGTAACTATTTTGCTTTCACTCCATTGCTACCAAGTGTTACATGTGGCACAGTGGAAGCAAGGAGCGTCGTTGAACCCATTCGCAGTATCACCCGCAAGAGCGGTGTAAATATTCATTTCAGTGAAGCTGAATGCTACAAGATCGATCAAAAGAACAACAAAGTTTTTTGTCGTGCTGTTGGTAAGGACAAAAAGTCTGGTGTCCAAGAAGAATTTTCAATTGATTATGATTACCTGGTAATAGGTATGGGAGGTCGTTCTAATACCTTCAACACACCTGGTGTTGAGGAACATGCCCATTTCCTGAAGGAAGTGGATGAAGCTCTAAAAATCCGCCGGAAAGTGGTTGAACTTTTTGAAAGAGCTAGCCTTCCTTCTTTACCTGTGGAAGAGAAGAAAAGGCTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAATTTTCTGCTGAGCTTCATGACTTTGTACATGAGGATATGGCTTTGTTATATCCTGAACTTAAAGAATACGTGAAGATTACTCTCTTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACTGAATTTGCTGAACTAAAGTTTGCCAGAGATGGCATTAATGTGAAGTTGGGATCTATGGTTGTGAACGTTGGTGAACACGAAATCACTGCCAAAGAAAGGTCAACTGGTCAAGTTGTTTCCATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAACTAGTTGAATTTATGAAACAGCTTGGCCAGATTAACAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTGGAAGGATCTGACAACATCTATGCTCTTGGTGATTGTGCCACTATAAATCAGCGTAAAGTTATGGAAGATATAGCCGTGATATTTAGCAAGGCTGACAAGGACAGTTCTGGAAAATTAGATCTTCAAGAATTCAAAAACGTTGTTGGTGACATTATTGAAAGGTACCCTCAAGTGGACATTTATTTAAAGAAGAACCAAATGAAAGACATGGCCAGCTTGCTAAAGAAATCTCAAGAAAGCGGCATTACAGTGGACATTGAATATTTCAAACAAGCCCTTTCCAAAGTAGACTCTCAGATGAAAAATCTTCCTGCCACTGCTCAGGTAGCTGCACAGCAAGGAGTGTATCTTGCAGACTGTTTCAACCGCATGGAGATGTGTGAGAGGTATCCTGAAGGTCCTATCAGGTTCAGAGGAGTTGGTCGCCATCGATTCCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCACTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCAGAGCACCCAGTGGCTCTGGTATTCAGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGGTTTTTGGTGGTTGGTGACTGGGGAAGGCGATTCATGTTTGGTAGGGATTCAAGTCAAATCTAA 1725 0.4301 MRWSSSFFHTASRVFNEYPSWSKSVLVCTVISGGGAVAFCDVKPESGNESPKKKVVVLGTGWAGTSFLKNMKSTSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITRKSGVNIHFSEAECYKIDQKNNKVFCRAVGKDKKSGVQEEFSIDYDYLVIGMGGRSNTFNTPGVEEHAHFLKEVDEALKIRRKVVELFERASLPSLPVEEKKRLLSFVVVGGGPTGVEFSAELHDFVHEDMALLYPELKEYVKITLLEAGDHILNMFDKRITEFAELKFARDGINVKLGSMVVNVGEHEITAKERSTGQVVSIPHGMVVWSTGIGARPELVEFMKQLGQINRRALVTDEWLRVEGSDNIYALGDCATINQRKVMEDIAVIFSKADKDSSGKLDLQEFKNVVGDIIERYPQVDIYLKKNQMKDMASLLKKSQESGITVDIEYFKQALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMEMCERYPEGPIRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFMFGRDSSQI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01626 574 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Phac11g01626 574 SMART efh_1 380 408 IPR002048 GO:0005509
Phac11g01626 574 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 43 405 - -
Phac11g01626 574 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Phac11g01626 574 Gene3D - 423 573 - -
Phac11g01626 574 Gene3D - 44 422 - -
Phac11g01626 574 PANTHER NADH DEHYDROGENASE 48 574 IPR045024 GO:0003954|GO:0006116
Phac11g01626 574 SUPERFAMILY EF-hand 370 460 IPR011992 -
Phac11g01626 574 SUPERFAMILY FAD/NAD(P)-binding domain 52 272 IPR036188 -
Phac11g01626 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 220 238 - -
Phac11g01626 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Phac11g01626 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Phac11g01626 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 348 370 - -
Phac11g01626 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 378 IPR023753 GO:0016491
Phac11g01626 574 SUPERFAMILY FAD/NAD(P)-binding domain 213 373 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01626 Phac-Chr11 15067425 15072042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01626 6 574 Chloroplast and Mitochondria Gene Families AT4G21490 65.866 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01626 K03885 - gmx:100820044 1049.65