Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01610 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTACCTCTTCCTCATTGAATCTGACCACACCCCATCACAGAATCATTCTCACACTCACAAACCCAAAGATCTTGACATCTCTATCAGAGGAGAACTTGTTTCCTTAATCTCACAGCTGTCCTGCATTTTGGATCCGGCTTTGTCTTATCTGGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGCAACCGAAGCCATGGGTCCTCAGGCTCATTGCTGTGTCTTGCATTTCTCTAGCTGTCAAGATGATGAGAACTGAATGCCCTGATGTTCAGGTAAAATCGCCATTATGCATTGCTCTTTTGAATCAAAGTGATGGGGGCATAATGTTTGAGACACAAACAGTGCGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACCCCATTCTCTTTCATACCTTTCTTCATTGCCTTGATGGGGCTCAAAGGCTCACCAATGGGGACGGTTCTGAAAAACCGTGCCTCTGAAATCATATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATAATTGCTGCATCTGCCCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCCTCCTTCTTAAAAGCAATAATCGATTCTTCATATGTAAATAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACGCCGATTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAATCCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGACGGAAAATCACTCCATGTGGAAACAATCCAACGATCCACAATTCTTGGATTAACTAA 963 0.4361 MEFDLENPLENLHSDAVSYLFLIESDHTPSQNHSHTHKPKDLDISIRGELVSLISQLSCILDPALSYLATNYLDRFLASQGISQPKPWVLRLIAVSCISLAVKMMRTECPDVQVKSPLCIALLNQSDGGIMFETQTVRRMEALILGALQWRMRSITPFSFIPFFIALMGLKGSPMGTVLKNRASEIIFMSQREIRLWEFKPSIIAASALLCASHELFPFQYPSFLKAIIDSSYVNKESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKSNGITVADSPLRQERDLKRRKITPCGNNPTIHNSWIN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01610 320 CDD CYCLIN_AtCycD-like_rpt2 155 246 - -
Phac11g01610 320 SMART Cyclin_C_2 155 268 IPR004367 -
Phac11g01610 320 Gene3D - 30 153 - -
Phac11g01610 320 SUPERFAMILY Cyclin-like 12 152 IPR036915 -
Phac11g01610 320 Pfam Cyclin, C-terminal domain 155 254 IPR004367 -
Phac11g01610 320 SMART cyclin_7 48 146 IPR013763 -
Phac11g01610 320 FunFam D6-type cyclin 150 244 - -
Phac11g01610 320 SUPERFAMILY Cyclin-like 136 251 IPR036915 -
Phac11g01610 320 Gene3D - 20 244 - -
Phac11g01610 320 Pfam Cyclin, N-terminal domain 21 152 IPR006671 -
Phac11g01610 320 FunFam D6-type cyclin 30 149 - -
Phac11g01610 320 PANTHER CYCLINS 15 257 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01610 Phac-Chr11 14860411 14863328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01610 1 302 Core Cell Cycle Gene Families AT4G03270 43.574 6.71e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01610 K18812 - gmx:100820404 506.523