LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac11g01608	ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTACCTCTTCCTCATTGAATCTGACCACACCCCATCACAGAATCATTCTCACACTCACAAACCCAAAGATCTTGACATCTCTATCAGAGGAGAACTTGTTTCCTTAATCTCACAGCTGTCCTGCATTTTGGATCCGGCTTTGTCTTATCTGGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGCAACCGAAGCCATGGGTCCTCAGGCTCATTGCTGTGTCTTGCATTTCTCTAGCTGTCAAGATGATGAGAACTGAATGCCCTGATGTTCAGGCTCTTTTGAATCAAAGTGATGGGGGCATAATGTTTGAGACACAAACAGTGCGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACCCCATTCTCTTTCATACCTTTCTTCATTGCCTTGATGGGGCTCAAAGGCTCACCAATGGGGACGGTTCTGAAAAACCGTGCCTCTGAAATCATATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATAATTGCTGCATCTGCCCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCCTCCTTCTTAAAAGCAATAATCGATTCTTCATATGTAAATAAAGTACACAACACATTCCTCCTTTATTATTATTTATTAGATTATATGAATTATTTTGGAGGAGAAGGGGGAAAGTGGCAAAGCATATTTTGA	777	0.4221	MEFDLENPLENLHSDAVSYLFLIESDHTPSQNHSHTHKPKDLDISIRGELVSLISQLSCILDPALSYLATNYLDRFLASQGISQPKPWVLRLIAVSCISLAVKMMRTECPDVQALLNQSDGGIMFETQTVRRMEALILGALQWRMRSITPFSFIPFFIALMGLKGSPMGTVLKNRASEIIFMSQREIRLWEFKPSIIAASALLCASHELFPFQYPSFLKAIIDSSYVNKVHNTFLLYYYLLDYMNYFGGEGGKWQSIF*	259

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac11g01608	258	Pfam	Cyclin, N-terminal domain	21	145	IPR006671	-
	Phac11g01608	258	Gene3D	-	20	210	-	-
	Phac11g01608	258	Gene3D	-	30	146	-	-
	Phac11g01608	258	SUPERFAMILY	Cyclin-like	12	145	IPR036915	-
	Phac11g01608	258	SUPERFAMILY	Cyclin-like	129	206	IPR036915	-
	Phac11g01608	258	Pfam	Cyclin, C-terminal domain	148	222	IPR004367	-
	Phac11g01608	258	PANTHER	CYCLINS	15	209	IPR039361	-
	Phac11g01608	258	SMART	cyclin_7	48	139	IPR013763	-
	Phac11g01608	258	CDD	CYCLIN_AtCycD-like_rpt2	148	221	-	-
	Phac11g01608	258	FunFam	D6-type cyclin	143	233	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac11g01608	Phac-Chr11	14860411	14863328	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac11g01608	1	229	Core Cell Cycle Gene Families	AT4G03270	44.672	1.76e-57	184

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac11g01608	K18812		-	gmx:100820404	385.571

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