Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01607 ATGGTAAGAGCTCCTTATTTTGATAAAAATGGAACAAAGAAAGGAGCATGGAGTGAGGAAGAGGATAAGAAGCTTATTGCTTATGTTGACAAATATGGCCACCCCAATTGGCGTCAACTTCCAAAGTTTGCAGGTTTGCAAAGATGTGGAAAAAGTTGCAGACTTCGATGGATGAATTACCTGCGCCCAAATCTAAAACGAGGGAACTATACCCCTAAGGAAGACCAAATCATCTCGGATTTGCATCAAAAGCATGGAAACAAATGGTCTTTGATTGCTGAAAGTCTACACGGAAGAACAGACAATGAGATAAAGAACTATTGGCACAGCCACCTAAAGAAGTTCCAAAACAGCAACATTAACACCTCTTGTGATGAAGATTTGAAGTCCATTGGATGCAAAGATTTTGAAATGCCAACGAACGAGGCTCTAGGTGTTGAATCTCTCCACATTTTGGAGAGCTCAGTGTCAATTTCCTCAGAAACTTCCTACACCGACCACAATTCCCCTTCACTTTCATCCTCTTCAAGTCACACGGAATCAACCATGAACTTGTGCAAGGAAGAAGAAAGCGTTGCTTCATTGGAAACATTGGATTCAGGGTTTAGTAGCAGTTTCTGGACCGAACCCTTCATTTTAGAAAACGCACTTGATCAAGATTATTTTCCCATTTCCTCTTATATAACAGAACCATTTTACTTGTGGTAG 708 0.4054 MVRAPYFDKNGTKKGAWSEEEDKKLIAYVDKYGHPNWRQLPKFAGLQRCGKSCRLRWMNYLRPNLKRGNYTPKEDQIISDLHQKHGNKWSLIAESLHGRTDNEIKNYWHSHLKKFQNSNINTSCDEDLKSIGCKDFEMPTNEALGVESLHILESSVSISSETSYTDHNSPSLSSSSSHTESTMNLCKEEESVASLETLDSGFSSSFWTEPFILENALDQDYFPISSYITEPFYLW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01607 235 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 188 - -
Phac11g01607 235 FunFam MYB-related transcription factor 13 66 - -
Phac11g01607 235 CDD SANT 69 112 IPR001005 -
Phac11g01607 235 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac11g01607 235 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac11g01607 235 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac11g01607 235 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac11g01607 235 CDD SANT 16 61 IPR001005 -
Phac11g01607 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac11g01607 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac11g01607 235 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Phac11g01607 235 Gene3D - 69 114 - -
Phac11g01607 235 Gene3D - 7 66 - -
Phac11g01607 235 SMART sant 66 114 IPR001005 -
Phac11g01607 235 SMART sant 13 63 IPR001005 -
Phac11g01607 235 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01607 Phac-Chr11 14810947 14812547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01607 1 216 MYB Transcription Factor Family AT2G31180 43.318 5.88e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01607 Myb_DNA-binding 3.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01607 K09422 - gmx:100781032 357.451