Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01606 ATGGTTTTTAAATTTTGGTTAATTGCTTACTCTTTCTTCTGTGCAACAGGTTTGCAAAGATGTGGAAAAAGTTGCAGACTTCGATGGATGAATTACCTGCGCCCAAATCTAAAACGAGGGAACTATACCCCTAAGGAAGACCAAATCATCTCGGATTTGCATCAAAAGCATGGAAACAAATGGTCTTTGATTGCTGAAAGTCTACACGGAAGAACAGACAATGAGATAAAGAACTATTGGCACAGCCACCTAAAGAAGTTCCAAAACAGCAACATTAACACCTCTTGTGATGAAGATTTGAAGTCCATTGGATGCAAAGATTTTGAAATGCCAACGAACGAGGCTCTAGGTGTTGAATCTCTCCACATTTTGGAGAGCTCAGTGTCAATTTCCTCAGAAACTTCCTACACCGACCACAATTCCCCTTCACTTTCATCCTCTTCAAGTCACACGGAATCAACCATGAACTTGTGCAAGGAAGAAGAAAGCGTTGCTTCATTGGAAACATTGGATTCAGGGTTTAGTAGCAGTTTCTGGACCGAACCCTTCATTTTAGAAAACGCACTTGATCAAGATTATTTTCCCATTTCCTCTTATATAACAGAACCATTTTACTTGTGGTAG 624 0.399 MVFKFWLIAYSFFCATGLQRCGKSCRLRWMNYLRPNLKRGNYTPKEDQIISDLHQKHGNKWSLIAESLHGRTDNEIKNYWHSHLKKFQNSNINTSCDEDLKSIGCKDFEMPTNEALGVESLHILESSVSISSETSYTDHNSPSLSSSSSHTESTMNLCKEEESVASLETLDSGFSSSFWTEPFILENALDQDYFPISSYITEPFYLW* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01606 207 CDD SANT 41 84 IPR001005 -
Phac11g01606 207 SUPERFAMILY Homeodomain-like 19 90 IPR009057 -
Phac11g01606 207 Gene3D - 41 86 - -
Phac11g01606 207 SMART sant 38 86 IPR001005 -
Phac11g01606 207 Pfam Myb-like DNA-binding domain 39 84 IPR001005 -
Phac11g01606 207 Gene3D - 7 38 - -
Phac11g01606 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Phac11g01606 207 PANTHER MYB DOMAIN PROTEIN 55 16 156 - -
Phac11g01606 207 MobiDBLite consensus disorder prediction 134 157 - -
Phac11g01606 207 ProSiteProfiles Myb-like domain profile. 34 84 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01606 Phac-Chr11 14810947 14812547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01606 1 135 MYB Transcription Factor Family AT1G79180 48.592 1.59e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac11g01606 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01606 K09422 - gmx:100781032 271.166