Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01603 ATGGTAAGAACTCCTTTCTATGACAAAAATGGATTGAAGAAAGGTGCATGGAGTAGAGAAGAAGATGATAAGTTAAGAGCTTATGTTCAGATATATGGTCACTCAAATTGGCGTCAACTCCCCAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGTTGGTTGAATTACTTGAGACCAAATCTAAAACACGGGAACTACACCTCAGAGGAAGAAGAAACAATCATCAAATTACACCAACAATTTGGAAATAGATGGTCCTTGATTGCTGAAAAACTTCCTGGAAGAACCGACAATGAGGTAAAGAACTATTGGCATAGCCACCTAAAAAAGAGCTTGAAGAGCTATGAAATGACACCATCTGAGTTGAAGTCAAAGCCAGGTGATAACTATAGTTTTGAAGGAAATTTAGATGAGAGTCGTGAATATGAAAATTCTGAAAACCTAGGTGCCAATAGTGGTGATATCTTCCCTCATATTTTAGAAAGTTCATTGGCCAGAGAGAACTATTTGGTTACCACCAATGCTGAAGAAGATGGTGTTCCTCCATTAGTATCACACAAAGAATTCAGCGGCGATTTTTGGTCTGAGCCATTCCTGGTAGAAGATAGTCTTGATACTTTTAAAGATGAGATTTGGAGTGGTAAAGGAATGGCACTGTTAATTCCAAACTTCGATGGCGCATATTTGTTTTAG 705 0.3858 MVRTPFYDKNGLKKGAWSREEDDKLRAYVQIYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTSEEEETIIKLHQQFGNRWSLIAEKLPGRTDNEVKNYWHSHLKKSLKSYEMTPSELKSKPGDNYSFEGNLDESREYENSENLGANSGDIFPHILESSLARENYLVTTNAEEDGVPPLVSHKEFSGDFWSEPFLVEDSLDTFKDEIWSGKGMALLIPNFDGAYLF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01603 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac11g01603 234 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac11g01603 234 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac11g01603 234 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Phac11g01603 234 CDD SANT 69 112 IPR001005 -
Phac11g01603 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac11g01603 234 FunFam Transcription factor RAX3 7 67 - -
Phac11g01603 234 CDD SANT 16 61 IPR001005 -
Phac11g01603 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 149 - -
Phac11g01603 234 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac11g01603 234 Gene3D - 7 67 - -
Phac11g01603 234 Gene3D - 68 134 - -
Phac11g01603 234 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac11g01603 234 SMART sant 66 114 IPR001005 -
Phac11g01603 234 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01603 Phac-Chr11 14756187 14757450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01603 1 207 MYB Transcription Factor Family AT2G31180 45.024 2.74e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01603 Myb_DNA-binding 2.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01603 K09422 - gmx:100776043 246.514