Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01602 ATGGTGAGAACCCCATCTTGGGACAAAAGTGGACTGAGGAAGGGTACTTGGACTCCTGAGGAAGATAGAAAATTAATTGCCTATGTTACCAGATATGGATCCTGGAATTGGCGCCAACTTCCTCGGTTTGCAGGTCTGGCAAGATGTGGGAAAAGCTGTAGACTGAGATGGATGAATTATCTGAGGCCTAATGTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGAATGCTCAAAAAACTTGGTAACAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATAACGAAATAAAAAACCATTGGCACACCACTCTTAAGAAAAGGTCTGAAATAAACACACTCACAAATCAAGAAGCTAGAGCCTTCAAATCAAAGAATAAAGATTCCAAACAAGGGAGGGACTCGGTTCCTAACAATAATAGTGTTACTGTTACTCTTCCATCCAATTCCCGGACTTATGATAATTCATCAGCCTCAGTCTCACCACTCTCATCTTCCAGCGGCGTGTTTTCCTCCACATCTTCAGATGATTGCAGTGCTGCCAGCATGAAAAATATGGTGTTTGAAGATGACTTTCGTTTTCTGGATTCATACATAGAGTCTATGAATGCAAGTTTCTGGACAGAGCTAAATCTGGGAGACGTCTCCTACAGTGCAGCAGGTGAAATAGTGTCAGGAGATACTAGTGGAGCAATCAAAAGTACAGATGCTAGCGTCCGTGATTCTCGTGCAATGTCTCTGCATGGGTTAACCAGCGAAAGTATTGTTGTTGATAATGACTCTCGCGGCTTTCCCGATACATATGCAGAGGCAACGGTTGAGAACTTTTGGATGCAGCCATATGTGGCGGACATTTCCCACGTTCCAAGCGAACTTCTTGTCCCTTCCGTGGTAGAATCTGAATATTTTACTCCAATCTATGATGATCTGTGGGGACAAAGTCATTTCTATTAG 975 0.4318 MVRTPSWDKSGLRKGTWTPEEDRKLIAYVTRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPNVKRGNFTPQEEECIIRMLKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSEINTLTNQEARAFKSKNKDSKQGRDSVPNNNSVTVTLPSNSRTYDNSSASVSPLSSSSGVFSSTSSDDCSAASMKNMVFEDDFRFLDSYIESMNASFWTELNLGDVSYSAAGEIVSGDTSGAIKSTDASVRDSRAMSLHGLTSESIVVDNDSRGFPDTYAEATVENFWMQPYVADISHVPSELLVPSVVESEYFTPIYDDLWGQSHFY* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01602 324 CDD SANT 69 112 IPR001005 -
Phac11g01602 324 CDD SANT 16 61 IPR001005 -
Phac11g01602 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac11g01602 324 Gene3D - 7 67 - -
Phac11g01602 324 FunFam MYB-related transcription factor 13 66 - -
Phac11g01602 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 207 - -
Phac11g01602 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac11g01602 324 Gene3D - 69 143 - -
Phac11g01602 324 SMART sant 13 63 IPR001005 -
Phac11g01602 324 SMART sant 66 114 IPR001005 -
Phac11g01602 324 MobiDBLite consensus disorder prediction 140 176 - -
Phac11g01602 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac11g01602 324 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac11g01602 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac11g01602 324 MobiDBLite consensus disorder prediction 123 176 - -
Phac11g01602 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac11g01602 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01602 Phac-Chr11 14696507 14698025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01602 1 143 MYB Transcription Factor Family AT2G31180 58.741 7.30e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01602 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01602 K09422 - gmx:778184 428.713