Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01601 ATGAACTATCTAAGGCCTAACCTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGGATGCTCAAAAAACTTGGTAACAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATAACGAAATAAAAAACCACTGGCACACCACTCTCAAGAAAAGGTCTCAACAAAATACAGTCACAAATGAAGAAGCCAGAGCCTCCAAATCAAAGAATAAAGAATCCAGGGCAGTGAGGGACTCGGTTCCCAACAAAAATGGTGTTACTGTTAGTCTTCCAGCTACCTCCCAGATTTCAGATAATTCATCAGGCTCATTCTCGCCAGTTTCATCCTCCAGCAGCGAGTTTTCCTCCATAACTTCAGATCATTCCAATTCTGCTAGTATGGAAAATTTGGTGTTGGAAGATGACTTCGGTTTTCTTGATTCATATGTGAATGAAAGTTTCTGGAAAGAACTCAATCTGGATGGAGTTTCCTACGGTGCACCTTGTGAAGTAGTGTCAAGAGATACTAATGACAGTTTTCAAAGTACAAATTCTACACAGAACGTTGATTCTTGTGCATTGTCTCCGCATCAATCATCCAGTGGAAGTATGGTTATGGAGAATGACTTTGGCACTTTTCTCGATGCGTATGGAGAGGTAACAGTTGATAACTTTTGGTCACAGCCATATGTGGTTGACGTGTCCCACGTTCCAAGCGAGCTACTTGTTCCCTCCGTGGAAGAATCTGAATATTTTGCTCCAGTGTATGATGATTTGTGGGGTCAAAGTCAATTTGTACAATAA 801 0.4157 MNYLRPNLKRGNFTPQEEECIIRMLKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSQQNTVTNEEARASKSKNKESRAVRDSVPNKNGVTVSLPATSQISDNSSGSFSPVSSSSSEFSSITSDHSNSASMENLVLEDDFGFLDSYVNESFWKELNLDGVSYGAPCEVVSRDTNDSFQSTNSTQNVDSCALSPHQSSSGSMVMENDFGTFLDAYGEVTVDNFWSQPYVVDVSHVPSELLVPSVEESEYFAPVYDDLWGQSQFVQ* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01601 266 Gene3D - 12 86 - -
Phac11g01601 266 SUPERFAMILY Homeodomain-like 1 65 IPR009057 -
Phac11g01601 266 CDD SANT 12 55 IPR001005 -
Phac11g01601 266 MobiDBLite consensus disorder prediction 46 126 - -
Phac11g01601 266 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Phac11g01601 266 MobiDBLite consensus disorder prediction 70 84 - -
Phac11g01601 266 PANTHER MYB DOMAIN PROTEIN 55 1 195 - -
Phac11g01601 266 MobiDBLite consensus disorder prediction 86 126 - -
Phac11g01601 266 MobiDBLite consensus disorder prediction 177 199 - -
Phac11g01601 266 FunFam Transcription factor MYB14 12 85 - -
Phac11g01601 266 SMART sant 9 57 IPR001005 -
Phac11g01601 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 59 IPR017930 -
Phac11g01601 266 ProSiteProfiles Myb-like domain profile. 5 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01601 Phac-Chr11 14668480 14669946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01601 1 156 MYB Transcription Factor Family AT3G23250 43.023 3.78e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac11g01601 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01601 K09422 - gmx:102666009 328.561