Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01600 ATGGTGAGAACCCCGTCTTGTGACAAAAGTGGACTGAGAAAGGGTACTTGGACTCCGGAGGAAGATATGAAGTTAGTTGCTTATGTCACTAGATACGGATGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTTGCAAGGTGTGGGAAAAGTTGTAGATTGAGATGGATGAACTATCTAAGGCCTAACCTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATCATCAGGATGCTCAAAAAACTTGGTAACAGATGGTCTGCTATTGCGGCTGAGTTACCAGGAAGAACAGATAACGAAATAAAAAACCACTGGCACACCACTCTCAAGAAAAGGTCTCAACAAAATACAGTCACAAATGAAGAAGCCAGAGCCTCCAAATCAAAGAATAAAGAATCCAGGGCAGTGAGGGACTCGGTTCCCAACAAAAATGGTGTTACTGTTAGTCTTCCAGCTACCTCCCAGATTTCAGATAATTCATCAGGCTCATTCTCGCCAGTTTCATCCTCCAGCAGCGAGTTTTCCTCCATAACTTCAGATCATTCCAATTCTGCTAGTATGGAAAATTTGGTGTTGGAAGATGACTTCGGTTTTCTTGATTCATATGTGAATGAAAGTTTCTGGAAAGAACTCAATCTGGATGGAGTTTCCTACGGTGCACCTTGTGAAGTAGTGTCAAGAGATACTAATGACAGTTTTCAAAGTACAAATTCTACACAGAACGTTGATTCTTGTGCATTGTCTCCGCATCAATCATCCAGTGGAAGTATGGTTATGGAGAATGACTTTGGCACTTTTCTCGATGCGTATGGAGAGGTAACAGTTGATAACTTTTGGTCACAGCCATATGTGGTTGACGTGTCCCACGTTCCAAGCGAGCTACTTGTTCCCTCCGTGGAAGAATCTGAATATTTTGCTCCAGTGTATGATGATTTGTGGGGTCAAAGTCAATTTGTACAATAA 972 0.4259 MVRTPSCDKSGLRKGTWTPEEDMKLVAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNLKRGNFTPQEEECIIRMLKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSQQNTVTNEEARASKSKNKESRAVRDSVPNKNGVTVSLPATSQISDNSSGSFSPVSSSSSEFSSITSDHSNSASMENLVLEDDFGFLDSYVNESFWKELNLDGVSYGAPCEVVSRDTNDSFQSTNSTQNVDSCALSPHQSSSGSMVMENDFGTFLDAYGEVTVDNFWSQPYVVDVSHVPSELLVPSVEESEYFAPVYDDLWGQSQFVQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01600 323 CDD SANT 69 112 IPR001005 -
Phac11g01600 323 SMART sant 13 63 IPR001005 -
Phac11g01600 323 SMART sant 66 114 IPR001005 -
Phac11g01600 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac11g01600 323 CDD SANT 16 61 IPR001005 -
Phac11g01600 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac11g01600 323 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac11g01600 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac11g01600 323 FunFam Transcription factor MYB14 69 142 - -
Phac11g01600 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac11g01600 323 MobiDBLite consensus disorder prediction 234 256 - -
Phac11g01600 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac11g01600 323 MobiDBLite consensus disorder prediction 103 183 - -
Phac11g01600 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac11g01600 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 234 - -
Phac11g01600 323 FunFam MYB-related transcription factor 13 66 - -
Phac11g01600 323 MobiDBLite consensus disorder prediction 143 183 - -
Phac11g01600 323 Gene3D - 69 143 - -
Phac11g01600 323 Gene3D - 14 66 - -
Phac11g01600 323 MobiDBLite consensus disorder prediction 127 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01600 Phac-Chr11 14668480 14669946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01600 1 214 MYB Transcription Factor Family AT2G31180 46.296 3.38e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01600 Myb_DNA-binding 4.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01600 K09422 - gmx:100777107 451.44