Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01599 ATGATGGTGAGAACCCCGAGCAGTGACAAAAATGGACTGAAGAAAGGAACATGGACACCAGAGGAAGACCAGAAGTTGGTTGATTATATTACTAGGTATGGCCACTGGAATTGGCGCCTGCTCCCCAAATTCGCAGGTCTTGCGAGATGTGGAAAGAGTTGCAGACTTAGGTGGTTGAATTACCTAAGGCCAAACCTGAAAAGAGGAAACTACAGTGAAGAAGAGGAGGAAACTATCATCAAGCTGCACCGACATCTGGGAAACAGATGGTCTGCTATTGCTGCACGGATTCCAGGAAGAACAGACAATGAAATAAAAAACTATTGGCACACCAACCTCAAGAAACGGTTTGAACAAGACTCAGCCACAGACTCTCAAGTATCAAACTCATGTGAACAATCCCTAACAACAACAGAACCAAGCGGAAATACTTTCCAAAGCTTTAACTCCACGCAAGATTATTCCCCATTTTTCCAGAATTCATCATCCTCCACAACAAGCACAGAGTGTAACACTGTCACCATCAACGAAAATCTGGCCCTGCAAGATGAATTTGCCTTTTGGGACGCTGACACGGATCTTGTGACCGGCAATTTGTGGTTAGAATCATATATGCGTGATATTTCGTACGTACCTTTTTTTTTTTGA 648 0.4352 MMVRTPSSDKNGLKKGTWTPEEDQKLVDYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPNLKRGNYSEEEEETIIKLHRHLGNRWSAIAARIPGRTDNEIKNYWHTNLKKRFEQDSATDSQVSNSCEQSLTTTEPSGNTFQSFNSTQDYSPFFQNSSSSTTSTECNTVTINENLALQDEFAFWDADTDLVTGNLWLESYMRDISYVPFFF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01599 215 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac11g01599 215 SMART sant 14 64 IPR001005 -
Phac11g01599 215 SMART sant 67 115 IPR001005 -
Phac11g01599 215 FunFam MYB-related transcription factor 14 67 - -
Phac11g01599 215 Gene3D - 70 139 - -
Phac11g01599 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Phac11g01599 215 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac11g01599 215 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 175 - -
Phac11g01599 215 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Phac11g01599 215 MobiDBLite consensus disorder prediction 122 142 - -
Phac11g01599 215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac11g01599 215 MobiDBLite consensus disorder prediction 120 142 - -
Phac11g01599 215 CDD SANT 70 113 IPR001005 -
Phac11g01599 215 Gene3D - 14 67 - -
Phac11g01599 215 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Phac11g01599 215 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac11g01599 215 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01599 Phac-Chr11 14635397 14643554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01599 2 155 MYB Transcription Factor Family AT2G31180 57.792 6.16e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac11g01599 Myb_DNA-binding 9.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01599 K09422 - gmx:100778518 336.65