Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01597 ATGATGGTGAGAACCCCGAGCAGTGACAAAAATGGACTGAAGAAAGGAACATGGACACCAGAGGAAGACCAGAAGTTGGTTGATTATATTACTAGGTATGGCCACTGGAATTGGCGCCTGCTCCCCAAATTCGCAGGTCTTGCGAGATGTGGAAAGAGTTGCAGACTTAGGTGGTTGAATTACCTAAGGCCAAACCTGAAAAGAGGAAACTACAGTGAAGAAGAGGAGGAAACTATCATCAAGCTGCACCGACATCTGGGAAACAGAATGAATTGA 276 0.4565 MMVRTPSSDKNGLKKGTWTPEEDQKLVDYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPNLKRGNYSEEEEETIIKLHRHLGNRMN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01597 91 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Phac11g01597 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 89 - -
Phac11g01597 91 SMART sant 14 64 IPR001005 -
Phac11g01597 91 SUPERFAMILY Homeodomain-like 16 89 IPR009057 -
Phac11g01597 91 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Phac11g01597 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Phac11g01597 91 Gene3D - 14 67 - -
Phac11g01597 91 FunFam MYB-related transcription factor 14 67 - -
Phac11g01597 91 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01597 Phac-Chr11 14635397 14643554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01597 2 89 MYB Transcription Factor Family AT4G21440 71.591 4.06e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac11g01597 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01597 K09422 - gmx:100777621 187.193