Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g01526 ATGGAGAATGATGTGGTTGCTGTTGTTGGTCCACTATCATCTGGAATAGCTCATATAATCTCTCATGTTGTTAATGAACTCCATGTACCTCTTCTGTCGTTTGGGGCAACTGACCCCACTCTATCTTCTCTACAATACCCATATTTTATCCGCACTACTCAGAACGATTATTTTCAGATGTATGCAGTTTCAGCCTTTATAAATTATCACAGATGGAGGGAGGTAATTGCCATCTATGTAGATGATGACAATGGAAGGAATGGGATTTCTGTATTGGGTGATGCACTGTCAAAGAAACGTGCCAAGATCTCTTACAAGGCTGCTTTTTCTCCTGGGGCCTCAGAAAGTGATATCAGTGACTTGTTAAATGAAGTGAACATGATGGAATCCCGAGTCTATGTTCTGCATGTGAATCCTGATACTGGTTTAGCAATCTTCTCTATTGCCAAGAAGCTCAGAATGATGGGCAGTGGCTATGTTTGGATTTCAACAGATTGGCTTCCTTCAGTGCTGGATTCCTTAGAGTCACCTGATCCTGGCACAATGGATCTCTTACAAGGGATCGTGGCTTTTCGTCATCACATTCCTGATACTGATCTCAAGAAGAATCTTCTCTCCAGGTTGAAAAGCCAAAGAGTCAAAGAGACTGTAAGCTTCAATTCTTATGCTTTTTATGCTTATGATTCTGTTTGGTTAGCAGCTCGTGCTCTTGATGCTTATCTCAACGAAGGTGGAAATATATCTTTTTCTAATGACCCTAAGTTGCAAGACACAAATGGAAGCATGTTGCATTTAGCGTCACTTCGTACCTTTGATGGTGGTCCACAGTTTCTCCAGACAGTTTTGGGAATGAACTTCACTGGTGTGAGTGGTCAAATTGAGTTTGACATGGACAAGAATTTACTTCATCCAGCATATGAAATTCTCAATATTGGTGGTAGTGGATTCCGTAGAATTGGTTATTGGTCTAATCATTCTGGTTTATCAGTTATAGCTCCTGAAACTTTATATCTGAAAAAGCCGTCAAACACATCTTTGCTGAGAAATCAGCAACTGCATAGTGTGATATGGCCTGGAGAGGTTACAGCTACACCAAGGGGGTGGGTATTTCCCAACAATGGACAGCCACTTAGGATAGCAGTTCCTAACCGAGTCAGCTACAAGGACTTTGTTTCTAAGGACAAGAACCCACCAGGGGTACAAGGCTATTGCATTGACGTCTTTGAAGCAGCCATAAAATTGTTGCCTTACCCTGTCCCACGAAAATACATGTTATTTGGAAATGGTAAAAGGAATCCTAGCTACAACGACCTTGTGGAACAAGTTGCACAAAATAACTTTGATGCAGTTGTTGGAGATGTTACAATTGTCACAAATAGGACAAGGATTCTGGATTTTACTCAACCTTTCTTGCCATCAGGGCTTGTTGTTGTTGTTCCTTTTGAGGAGCAGAAGTCAAGCCCTTTGTCTTTCCTTGAGCCATTCACTACTGAAATGTGGTGTGTCACTGGTGTTTTTTTTCTTTTTGTTGGAAGTGTTGTATGGATTCTTGAGCACCGGCTCAATCCTGACTTCCGGGGTTCACCGAGGAAACAACTTATAACAGTGTTTTGGTTTAGTTTCTCAACAATGTTTTTCTCTCACAGGGAGAACACTGTGAGTGGACTTGGACGATTGGTGCTAATCATATGGCTCTTTGTGGTGTTGATCATAAATTCAAGCTACACTGCTAGCTTGACCTCTATCCTCACTGTGCAGCAACTGTCATCTCAAATTGAAGGAATTGACAGCTTGATCTCAAGTACTGAACCGATTGGAATTCAAGATGGTTCATTTGCACGGAAGTATCTTGTAGATGACCTCCATATAGCTGAATCTAGAATAGTTACGTTGAAAAACATGGAGGATTATATTGATGCCCTTCAGCGAGGCCCTAAAGCTGGAGGGGTTGTGGCAGTTGTTGATGAGCTTCCTTACATTGAGGTCTTGATGTCCAGCAGTCACTGTAAGTTCAGAATTGTTGGCCAGGAGTTCACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACTTGTCAACAGCCATTCTTCAACTTTCTGAGAGTGGTGACCTGCAAAGGATTCATGACAAATGGCTTAATATAAAGGAGTGTACAACCGTTGAAGTTGATTCAAACAAACTAGCTCTGACAAGCTTCTGGGGCCTCTTTCTTATATGTGGCATTGCATTTTTCATTGCCCTGATTATTTTCTTTGCTAGAATCTTCTGTCAATATAACAAATTTATCCCAGAGTCTGAAAAAACTGATGAGGAAATTCAACCAGTCAGGAGGTCAAGACGTCCAAGCAGAACTCCTAGCCTGAAGAAGTTGATGGTATTTGTAGATAAAAGGGAAGCAGAAGTCAAAGAGATACTTAGGGAAAACAAAAAAAGGAGACACAGCCAAAGCTTGGATGACCATTCTGTTCCATCAGCCATCTAG 2499 0.4162 MENDVVAVVGPLSSGIAHIISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDYFQMYAVSAFINYHRWREVIAIYVDDDNGRNGISVLGDALSKKRAKISYKAAFSPGASESDISDLLNEVNMMESRVYVLHVNPDTGLAIFSIAKKLRMMGSGYVWISTDWLPSVLDSLESPDPGTMDLLQGIVAFRHHIPDTDLKKNLLSRLKSQRVKETVSFNSYAFYAYDSVWLAARALDAYLNEGGNISFSNDPKLQDTNGSMLHLASLRTFDGGPQFLQTVLGMNFTGVSGQIEFDMDKNLLHPAYEILNIGGSGFRRIGYWSNHSGLSVIAPETLYLKKPSNTSLLRNQQLHSVIWPGEVTATPRGWVFPNNGQPLRIAVPNRVSYKDFVSKDKNPPGVQGYCIDVFEAAIKLLPYPVPRKYMLFGNGKRNPSYNDLVEQVAQNNFDAVVGDVTIVTNRTRILDFTQPFLPSGLVVVVPFEEQKSSPLSFLEPFTTEMWCVTGVFFLFVGSVVWILEHRLNPDFRGSPRKQLITVFWFSFSTMFFSHRENTVSGLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTEPIGIQDGSFARKYLVDDLHIAESRIVTLKNMEDYIDALQRGPKAGGVVAVVDELPYIEVLMSSSHCKFRIVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSESGDLQRIHDKWLNIKECTTVEVDSNKLALTSFWGLFLICGIAFFIALIIFFARIFCQYNKFIPESEKTDEEIQPVRRSRRPSRTPSLKKLMVFVDKREAEVKEILRENKKRRHSQSLDDHSVPSAI* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g01526 832 Pfam Bacterial extracellular solute-binding proteins, family 3 387 719 IPR001638 -
Phac11g01526 832 PIRSF IGluLR_plant 1 831 IPR017103 -
Phac11g01526 832 Gene3D - 371 487 - -
Phac11g01526 832 Gene3D - 55 328 - -
Phac11g01526 832 FunFam Glutamate receptor 372 488 - -
Phac11g01526 832 Gene3D - 610 722 - -
Phac11g01526 832 Gene3D - 488 608 - -
Phac11g01526 832 CDD PBP1_GABAb_receptor_plant 2 330 IPR044440 -
Phac11g01526 832 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Phac11g01526 832 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Phac11g01526 832 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Phac11g01526 832 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Phac11g01526 832 FunFam Glutamate receptor 488 618 - -
Phac11g01526 832 MobiDBLite consensus disorder prediction 811 832 - -
Phac11g01526 832 Pfam Receptor family ligand binding region 2 312 IPR001828 -
Phac11g01526 832 FunFam Glutamate receptor 614 722 - -
Phac11g01526 832 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 784 IPR015683 -
Phac11g01526 832 Gene3D - 1 303 - -
Phac11g01526 832 Pfam Ligand-gated ion channel 720 748 IPR001320 GO:0015276|GO:0016020
Phac11g01526 832 SUPERFAMILY Periplasmic binding protein-like I 2 369 IPR028082 -
Phac11g01526 832 SUPERFAMILY Periplasmic binding protein-like II 353 718 - -
Phac11g01526 832 CDD GluR_Plant 375 718 - -
Phac11g01526 832 SMART GluR_14 378 720 IPR001320 GO:0015276|GO:0016020
Phac11g01526 832 FunFam Glutamate receptor 55 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g01526 Phac-Chr11 13080663 13086466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g01526 1 685 Ion Channels AT1G05200 69.489 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g01526 K05387 - gmx:100802782 1430.62